RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CCL23P55773 120 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 KCNK10P57789 538 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 HTRA3P83110 453 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CREMQ03060 361 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 BCL2L1Q07817 233 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CDH18Q13634 790 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 RCAN2Q14206 197 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 INPP5AQ14642 412 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ADRM1Q16186 407 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 RBBP7Q16576 425 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 GPR33Q49SQ1 333 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 VPS26BQ4G0F5 336 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LCN8Q6JVE9 175 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LAYNQ6UX15 382 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LINGO4Q6UY18 593 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.33□□□□□ -0.764e-10■■■■□ 20.7
PABPC1-224ENST00000610907 RNF165Q6ZSG1 346 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 SNX20Q7Z614 316 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ARPINQ7Z6K5 226 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 DDX53Q86TM3 631 aaKnown RBP10.33□□□□□ -0.76
PABPC1-224ENST00000610907 SLC15A3Q8IY34 581 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 RBFAQ8N0V3 343 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CBARPQ8N350 705 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CPXM2Q8N436 756 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 PACRGLQ8N7B6 248 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ANKFN1Q8N957 763 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 WBP2Q969T9 261 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LRRC58Q96CX6 371 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 MYO19Q96H55 970 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF597Q96LX8 424 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 KCNA7Q96RP8 456 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 SLC30A3Q99726 388 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 OSBPL11Q9BXB4 747 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CLPBQ9H078 707 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF696Q9H7X3 374 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 BPIFA1Q9NP55 256 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CCM2LQ9NUG4 571 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-224ENST00000610907 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-224ENST00000610907 PADI4Q9UM07 663 aa10.33□□□□□ -0.76
PABPC1-224ENST00000610907 CEP350Q5VT06 3117 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 TRBV5-4A0A0C4DH59 114 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 FAM234BA2RU67 622 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 NME4O00746 187 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 RAD51BO15315 384 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 EEDO75530 441 aaKnown RBP10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SLC22A3O75751 556 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 URODP06132 367 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 PFKLP17858 780 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 LAG3P18627 525 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 MSH3P20585 1137 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ITGALP20701 1170 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 IL10P22301 178 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 DGKAP23743 735 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SLC6A2P23975 617 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 RFC2P35250 354 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 CSKP41240 450 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 RALGDSQ12967 914 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SPOUT1Q5T280 376 aaKnown RBP10.32□□□□□ -0.76
PABPC1-224ENST00000610907 FOXB2Q5VYV0 432 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 PTRHD1Q6GMV3 140 aaKnown RBP10.32□□□□□ -0.76
PABPC1-224ENST00000610907 HTR3DQ70Z44 454 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 FRA10AC1Q70Z53 315 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 MICAL3Q7RTP6 2002 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 GALNT13Q8IUC8 556 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 CPNE9Q8IYJ1 553 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 PDPRQ8NCN5 879 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 PHC3Q8NDX5 983 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ADAMTS19Q8TE59 1207 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ZFAND2BQ8WV99 257 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SLCO4A1Q96BD0 722 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SLC45A3Q96JT2 553 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ANAPC1Q9H1A4 1944 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ZFYVE1Q9HBF4 777 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 PAK6Q9NQU5 681 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SPG21Q9NZD8 308 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 KLHL42Q9P2K6 505 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF225Q9UK10 706 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 OGDHLQ9ULD0 1010 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 BTRCQ9Y297 605 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 INSL5Q9Y5Q6 135 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 ST14Q9Y5Y6 855 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 SLC4A7Q9Y6M7 1214 aa10.32□□□□□ -0.76
PABPC1-224ENST00000610907 FXYD1O00168 92 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 GLUD1P00367 558 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 OTCP00480 354 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 TRBC1P01850 177 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 GPIP06744 558 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 FAM58BPP0C7Q3 252 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 UMPSP11172 480 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 PCSK2P16519 638 aa10.31□□□□□ -0.76
PABPC1-224ENST00000610907 RPL5P46777 297 aaKnown RBP10.31□□□□□ -0.76
PABPC1-224ENST00000610907 AGTR2P50052 363 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms