RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RING1Q06587 406 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 RALGDSQ12967 914 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 MPP2Q14168 576 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 PDGFRLQ15198 375 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 VPS26BQ4G0F5 336 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 IL23RQ5VWK5 629 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 FAM171BQ6P995 826 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 TAS1R1Q7RTX1 841 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 SNX20Q7Z614 316 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 PIGWQ7Z7B1 504 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 UMODL1-AS1Q8N2C9 162 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 DCAF4L2Q8NA75 395 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 FAM13CQ8NE31 585 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 HERVK_113Q902F9 699 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 RIPOR3Q96MK2 946 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 TSGA13Q96PP4 275 aa7.21□□□□□ -1.25
CSDE1-218ENST00000610726 CORO1CQ9ULV4 474 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF487B1APH4 448 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PEX1O43933 1283 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 MAFKO60675 156 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 SNUPNO95149 360 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 GSNP06396 782 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 HPGDP15428 266 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 GLDCP23378 1020 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF33AQ06730 810 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 CHIT1Q13231 466 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 TMED1Q13445 227 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 UBAP2Q5T6F2 1119 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 ZFP1Q6P2D0 407 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 RPS27LQ71UM5 84 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 AMIGO2Q86SJ2 522 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 C17orf64Q86WR6 236 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 UTP15Q8TED0 518 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 FCRL3Q96P31 734 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 RIOK2Q9BVS4 552 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 SGK2Q9HBY8 427 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 INTS10Q9NVR2 710 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 H2AFY2Q9P0M6 372 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 MAST2Q6P0Q8 1798 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 ENO4A6NNW6 628 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 RFXANKO14593 260 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PIP5K1BO14986 540 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 GMPRP36959 345 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PTDSS1P48651 473 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 IDH3AP50213 366 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 NAA20P61599 178 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 NTHL1P78549 312 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 DAB2P98082 770 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 CREB5Q02930 508 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 SCAPQ12770 1279 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 SF1Q15637 639 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 MYLK3Q32MK0 819 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PLEKHG4Q58EX7 1191 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 ZC3H12BQ5HYM0 836 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 CELF5Q8N6W0 485 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 PNPLA1Q8N8W4 532 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 LEMD2Q8NC56 503 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 OSCP1Q8WVF1 389 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 CDK15Q96Q40 435 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 KIFC1Q9BW19 673 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 LRMDAQ9H2I8 198 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 WDR6Q9NNW5 1121 aaKnown RBP7.21□□□□□ -1.26
CSDE1-218ENST00000610726 IL23AQ9NPF7 189 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 SLCO3A1Q9UIG8 710 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 ENTPD4Q9Y227 616 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 C15orf41Q9Y2V0 281 aa7.21□□□□□ -1.26
CSDE1-218ENST00000610726 K7ERQ8 282 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TRIM38O00635 465 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CLOCKO15516 846 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TGM5O43548 720 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 HS6ST1O60243 411 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DLX3O60479 287 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 RRM2P31350 389 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 HK2P52789 917 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CCDC85BQ15834 202 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 METTL21CQ5VZV1 264 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PM20D1Q6GTS8 502 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 MICU2Q8IYU8 434 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PLD6Q8N2A8 252 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 HDDC3Q8N4P3 179 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 C10orf53Q8N6V4 93 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SKA1Q96BD8 255 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 QRFPRQ96P65 431 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PSKH2Q96QS6 385 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GPR22Q99680 433 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 FEM1AQ9BSK4 669 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ROGDIQ9GZN7 287 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 LRTM1Q9HBL6 345 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZDHHC4Q9NPG8 344 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ATAD3AQ9NVI7 634 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ANAPC2Q9UJX6 822 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ERVW-1Q9UQF0 538 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 BACE2Q9Y5Z0 518 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM233B4DJY2 109 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CDC7O00311 574 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 WNT9AO14904 365 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms