RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 EFCAB7A8K855 629 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 RHPN2P1A8MT19 583 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 DDX3YO15523 660 aaKnown RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 PIRTP0C851 137 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 MAP4P27816 1152 aaKnown RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 CDK3Q00526 305 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 LYSMD3Q7Z3D4 306 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 CDKL3Q8IVW4 592 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 LRRC8AQ8IWT6 810 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 RIOK2Q9BVS4 552 aaKnown RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 TRIT1Q9H3H1 467 aaKnown RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 SUDS3Q9H7L9 328 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-208ENST00000608287 RDH14Q9HBH5 336 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 PRDM8Q9NQV8 689 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 PKD2L2Q9NZM6 624 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 RSPH14Q9UHP6 348 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 TRHDEQ9UKU6 1024 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 KCTD3Q9Y597 815 aa19.03■□□□□ 0.64
SGMS1-208ENST00000608287 CACNA1DQ01668 2161 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 PRSS38A1L453 326 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 GOLGA6L9A6NEM1 432 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 B4E171 279 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 MKRN2OSH3BPM6 223 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 NDST3O95803 873 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 RBP3P10745 1247 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 FGF3P11487 239 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-208ENST00000608287 TEAD1P28347 426 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 TSPAN7P41732 249 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 TNNT3P45378 269 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-208ENST00000608287 GPR3P46089 330 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 LIMK2P53671 638 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 B4GALNT1Q00973 533 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 AMZ1Q400G9 498 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 DARS2Q6PI48 645 aaKnown RBP19.02■□□□□ 0.64
SGMS1-208ENST00000608287 NLGN4XQ8N0W4 816 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 GALNT11Q8NCW6 608 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 NLGN4YQ8NFZ3 816 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-208ENST00000608287 HES6Q96HZ4 224 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 FCRL5Q96RD9 977 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 AGAP2Q99490 1192 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 ZFYVE1Q9HBF4 777 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 SLC39A1Q9NY26 324 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 SHOC2Q9UQ13 582 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 B3GALT1Q9Y5Z6 326 aa19.02■□□□□ 0.64
SGMS1-208ENST00000608287 NRDCO43847 1150 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 SOD1P00441 154 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 SLC4A1P02730 911 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 PYGLP06737 847 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 CCDC175P0C221 793 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 SPINT3P49223 89 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 WNT3AP56704 352 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 NR1D2Q14995 579 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 TCTN3Q6NUS6 607 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 DOK6Q6PKX4 331 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 KDELC1Q6UW63 502 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 ADAMTSL4Q6UY14 1074 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 TMPRSS9Q7Z410 1059 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 ZNF438Q7Z4V0 828 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 NLRP8Q86W28 1048 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 RAVER1Q8IY67 606 aaKnown RBP19.01■□□□□ 0.63
SGMS1-208ENST00000608287 RCBTB1Q8NDN9 531 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 OR4D9Q8NGE8 314 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 ART4Q93070 314 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 CCDC74BQ96LY2 380 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 ZPBPQ9BS86 351 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 FRMD8Q9BZ67 464 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-208ENST00000608287 GPR63Q9BZJ6 419 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 TMEM168Q9H0V1 697 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 CARS2Q9HA77 564 aaKnown RBP19.01■□□□□ 0.63
SGMS1-208ENST00000608287 GRPEL1Q9HAV7 217 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 MAGEE1Q9HCI5 957 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 ZNF711Q9Y462 761 aa19.01■□□□□ 0.63
SGMS1-208ENST00000608287 IGHV5-10-1A0A0J9YXX1 117 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 INPP4BO15327 924 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 KCNN4O15554 427 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 STK10O94804 968 aaKnown RBP19■□□□□ 0.63
SGMS1-208ENST00000608287 DDAH2O95865 285 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 CEACAM5P06731 702 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 PRKAR1AP10644 381 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 ALDH4A1P30038 563 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 RIPPLY3P57055 190 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 ITPRIPL1Q6GPH6 555 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 IPMKQ8NFU5 416 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 OXNAD1Q96HP4 312 aaPredicted RBP19■□□□□ 0.63
SGMS1-208ENST00000608287 FAM83DQ9H4H8 585 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 LZTFL1Q9NQ48 299 aa19■□□□□ 0.63
SGMS1-208ENST00000608287 UTP20O75691 2785 aaKnown RBP18.99■□□□□ 0.63
SGMS1-208ENST00000608287 ARHGEF17Q96PE2 2063 aaPredicted RBP18.99■□□□□ 0.63
SGMS1-208ENST00000608287 LOC285095A0A1B0GVY8 99 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 RGSL1A5PLK6 1076 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 NKX2-8O15522 239 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 TCN2P20062 427 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 GNPDA1P46926 289 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 POLD2P49005 469 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 CCZ1BP86790 482 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 CCZ1P86791 482 aaPredicted RBP18.99■□□□□ 0.63
SGMS1-208ENST00000608287 ABHD18Q0P651 414 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 MPP3Q13368 585 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 DEFB109BQ30KR1 87 aa18.99■□□□□ 0.63
SGMS1-208ENST00000608287 HIST2H2BCQ6DN03 193 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms