RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MFSD3Q96ES6 412 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 SIGLEC10Q96LC7 697 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 DPH5Q9H2P9 285 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 DPEP2Q9H4A9 486 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 CAAP1Q9H8G2 361 aa14.08□□□□□ -0.16
CTSA-219ENST00000607841 DNMT3AQ9Y6K1 912 aaPredicted RBP14.08□□□□□ -0.16
CTSA-219ENST00000607841 ADAMTS9Q9P2N4 1935 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 KLHL33A6NCF5 533 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 F8W8V4 182 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 PFDN6O15212 129 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 ZNF500O60304 480 aaPredicted RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 USP1O94782 785 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 TTC4O95801 387 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 POLBP06746 335 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 CELA2BP08218 269 aaPredicted RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 ACP5P13686 325 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 ATP1B2P14415 290 aaPredicted RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 CKMT2P17540 419 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 FOXN2P32314 431 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 CA5AP35218 305 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 ACTR1BP42025 376 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 DRG2P55039 364 aaKnown RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 ACTR1AP61163 376 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 DAB2P98082 770 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 DHX9Q08211 1270 aaKnown RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 ITIH4Q14624 930 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 HIF1AQ16665 826 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 INSCQ1MX18 579 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 BBS9Q3SYG4 887 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 ANKRD20A4Q4UJ75 823 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 FNBP1LQ5T0N5 605 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 KIAA0930Q6ICG6 404 aaPredicted RBP14.07□□□□□ -0.16
CTSA-219ENST00000607841 MRNIPQ6NTE8 343 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 PSAPL1Q6NUJ1 521 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 TMEM220Q6QAJ8 160 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 TMEM135Q86UB9 458 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 ARL10Q8N8L6 244 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 CCL4L1Q8NHW4 92 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 LRRC39Q96DD0 335 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 TIMM29Q9BSF4 260 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 LRRC1Q9BTT6 524 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 BOCQ9BWV1 1114 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 RPS6KL1Q9Y6S9 549 aa14.07□□□□□ -0.16
CTSA-219ENST00000607841 IGLV3-16A0A075B6K0 115 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 OR51F1A6NGY5 319 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 ESPNB1AK53 854 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 QSOX1O00391 747 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 CD3EAPO15446 510 aaKnown RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 AP2A2O94973 939 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 VAPBO95292 243 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 PGAM1P18669 254 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 AK4P27144 223 aaPredicted RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 PMLP29590 882 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 NSG1P42857 185 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 TTPAP49638 278 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 CDKN1CP49918 316 aaPredicted RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 CLCNKAP51800 687 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 NR0B2Q15466 257 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 DBN1Q16643 649 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 PROX2Q3B8N5 592 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 SLC30A9Q6PML9 568 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 CES3Q6UWW8 571 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 AMZ2Q86W34 360 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 NRROSQ86YC3 692 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 PIANPQ8IYJ0 282 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 GABPB2Q8TAK5 448 aaPredicted RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 ZNF669Q96BR6 464 aaPredicted RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 APOLD1Q96LR9 279 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 EBNA1BP2Q99848 306 aaKnown RBP14.06□□□□□ -0.16
CTSA-219ENST00000607841 VPS37BQ9H9H4 285 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 TAAR2Q9P1P5 351 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 GULP1Q9UBP9 304 aa14.06□□□□□ -0.16
CTSA-219ENST00000607841 OR2AG2A6NM03 316 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 POP7O75817 140 aaKnown RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 PRSS56P0CW18 603 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 CKMT1AP12532 417 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 SLC2A4P14672 509 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 ZNF7P17097 686 aaPredicted RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 KCNA4P22459 653 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 CTSCP53634 463 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 THOC5Q13769 683 aaKnown RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 BCL7AQ4VC05 210 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 OGFOD3Q6PK18 319 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 CENPUQ71F23 418 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 DGLUCYQ7Z3D6 616 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 ZNF547Q8IVP9 402 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 OTUD6BQ8N6M0 293 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms