RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 PADI1Q9ULC6 663 aa17.51■□□□□ 0.39
CCDC12-212ENST00000605358 CAPN11Q9UMQ6 739 aa17.51■□□□□ 0.39
CCDC12-212ENST00000605358 ZNF106Q9H2Y7 1883 aaKnown RBP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 C21orf140B9A014 251 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 NDUFA10O95299 355 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 IDSP22304 550 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 CAPZBP47756 277 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 GFERP55789 205 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 SLC10A2Q12908 348 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 NT5DC3Q86UY8 548 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 PPP1R3BQ86XI6 285 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 RASGRP3Q8IV61 690 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 CNTD1Q8N815 330 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 TEX19Q8NA77 164 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 GPR26Q8NDV2 337 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 BRSK1Q8TDC3 778 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 MIB2Q96AX9 1013 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 IMP4Q96G21 291 aaKnown RBP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 TGM7Q96PF1 710 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 RNF157Q96PX1 679 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 VPS35Q96QK1 796 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 OR6C1Q96RD1 312 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 SCHIP1Q9P0W5 487 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 CROTQ9UKG9 612 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 SLC30A1Q9Y6M5 507 aa17.5■□□□□ 0.39
CCDC12-212ENST00000605358 USP9YO00507 2555 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-212ENST00000605358 RELNP78509 3460 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 CDK14O94921 469 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 NELFEP18615 380 aaKnown RBP17.49■□□□□ 0.39
CCDC12-212ENST00000605358 F8A1P23610 371 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 KDELR1P24390 212 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 ANP32AP39687 249 aaKnown RBP17.49■□□□□ 0.39
CCDC12-212ENST00000605358 PBX1P40424 430 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 TPM4P67936 248 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 CDK18Q07002 472 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 PDK1Q15118 436 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 ZDHHC20Q5W0Z9 365 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 CCDC70Q6NSX1 233 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 KLHL35Q6PF15 583 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 APLFQ8IW19 511 aaPredicted RBP17.49■□□□□ 0.39
CCDC12-212ENST00000605358 GALNT6Q8NCL4 622 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 UBXN4Q92575 508 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 TADA1Q96BN2 335 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 GPR63Q9BZJ6 419 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 SLC25A51Q9H1U9 297 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 PDE7BQ9NP56 450 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 CTTNBP2NLQ9P2B4 639 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 SLC23A2Q9UGH3 650 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 TP53TG5Q9Y2B4 290 aa17.49■□□□□ 0.39
CCDC12-212ENST00000605358 LUC7L2Q9Y383 392 aaKnown RBP17.49■□□□□ 0.39
CCDC12-212ENST00000605358 PDZK1P1A8MUH7 402 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 KCNK1O00180 336 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 SPAG6O75602 509 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 CREG1O75629 220 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 RFPL1O75677 317 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 RASSF9O75901 435 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 KIAA0754O94854 1291 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 ZFXP17010 805 aaPredicted RBP17.48■□□□□ 0.39
CCDC12-212ENST00000605358 ZNF28P17035 718 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 TYRP1P17643 537 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 PMS2P54278 862 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 IQCB1Q15051 598 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 GPR87Q9BY21 358 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 NENFQ9UMX5 172 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 MAN2B2Q9Y2E5 1009 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 ZNF711Q9Y462 761 aa17.48■□□□□ 0.39
CCDC12-212ENST00000605358 DNMT3AQ9Y6K1 912 aaPredicted RBP17.48■□□□□ 0.39
CCDC12-212ENST00000605358 PPP1R12AO14974 1030 aaPredicted RBP17.47■□□□□ 0.39
CCDC12-212ENST00000605358 BRAFP15056 766 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 GJC1P36383 396 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 HALP42357 657 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 SEPHS1P49903 392 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 GALNT3Q14435 633 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ATP1A1-AS1Q5TC04 95 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 SLC9A4Q6AI14 798 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 CRTC3Q6UUV7 619 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ASB18Q6ZVZ8 466 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 KMT5CQ86Y97 462 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 ZNF547Q8IVP9 402 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 PLD5Q8N7P1 536 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 CTNNBL1Q8WYA6 563 aaPredicted RBP17.47■□□□□ 0.39
CCDC12-212ENST00000605358 PSMG3-AS1Q96PY0 264 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 TRABDQ9H4I3 376 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 LHX9Q9NQ69 397 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 SHOC2Q9UQ13 582 aa17.47■□□□□ 0.39
CCDC12-212ENST00000605358 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
CCDC12-212ENST00000605358 KATNA1O75449 491 aa17.46■□□□□ 0.39
CCDC12-212ENST00000605358 NDST3O95803 873 aa17.46■□□□□ 0.39
CCDC12-212ENST00000605358 BPIP17213 487 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms