RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 SLC30A1Q9Y6M5 507 aa13.66□□□□□ -0.22
UPF1-205ENST00000598209 CHD8Q9HCK8 2581 aa13.66□□□□□ -0.22
UPF1-205ENST00000598209 TRBV23OR9-2A0A075B6M9 112 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 AGAP14A8MT82 685 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 H7C0S8 307 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 NTN3O00634 580 aaPredicted RBP13.65□□□□□ -0.22
UPF1-205ENST00000598209 PHF2O75151 1096 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 TCEA3O75764 348 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 KRT14P02533 472 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 RPLP0P05388 317 aaKnown RBP13.65□□□□□ -0.22
UPF1-205ENST00000598209 PROS1P07225 676 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 PSMA3P25788 255 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 CTSCP53634 463 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 SPIDRQ14159 915 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 ZRANB3Q5FWF4 1079 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
UPF1-205ENST00000598209 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 C11orf96Q7Z7L8 435 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 NXPE1Q8N323 547 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 SFRP1Q8N474 314 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 SLC37A2Q8TED4 501 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
UPF1-205ENST00000598209 DNAJC16Q9Y2G8 782 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
UPF1-205ENST00000598209 MAP1BP46821 2468 aaKnown RBP13.65□□□□□ -0.22
UPF1-205ENST00000598209 BPTFQ12830 3046 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.64□□□□□ -0.23
UPF1-205ENST00000598209 A0A1W2PQM1 296 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 A6NCN8 305 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TMEM8BA6NDV4 472 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 OR2AG2A6NM03 316 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 PPM1DO15297 605 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 F3P13726 295 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 SLC2A4P14672 509 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 VCLP18206 1134 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TPSB2P20231 275 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 ADRA1DP25100 572 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
UPF1-205ENST00000598209 ARSDP51689 593 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TERF1P54274 439 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 B4GALNT1Q00973 533 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 GPS1Q13098 491 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 NR1D2Q14995 579 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TPSAB1Q15661 275 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 ISXQ2M1V0 245 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 GPR33Q49SQ1 333 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TSTD2Q5T7W7 516 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 PAPD7Q5XG87 772 aaKnown RBP13.64□□□□□ -0.23
UPF1-205ENST00000598209 IYDQ6PHW0 289 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 DET1Q7L5Y6 550 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 DCUN1D1Q96GG9 259 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 GFM1Q96RP9 751 aaKnown RBP13.64□□□□□ -0.23
UPF1-205ENST00000598209 PRDM8Q9NQV8 689 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TCAF1Q9Y4C2 921 aa13.64□□□□□ -0.23
UPF1-205ENST00000598209 TRBV5-4A0A0C4DH59 114 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 TCRBV7S3A2A0A539 114 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 CTAGE9A4FU28 777 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 PRR19A6NJB7 356 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 OR5K4A6NMS3 321 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 D6RAR5 112 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 B4GAT1O43505 415 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 KCNJ13O60928 360 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 POP7O75817 140 aaKnown RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 PRSS56P0CW18 603 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 RALBP11234 206 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ACRV1P26436 265 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ALDH4A1P30038 563 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 GPR3P46089 330 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 FASLGP48023 281 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 FNTAP49354 379 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 PDX1P52945 283 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 OR1D5P58170 312 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 CDK16Q00536 496 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 HHEXQ03014 270 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 CACNG1Q06432 222 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 KCNJ11Q14654 390 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 FNBP1LQ5T0N5 605 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 TAS2R42Q7RTR8 314 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 AMZ2Q86W34 360 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 SERPINA9Q86WD7 417 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 KDF1Q8NAX2 398 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 PPHLN1Q8NEY8 458 aaKnown RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 OR13J1Q8NGT2 312 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 GRK7Q8WTQ7 553 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 NAT14Q8WUY8 206 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms