RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 SLC31A1O15431 190 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 TRIM16O95361 564 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 FTH1P02794 183 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 PCCBP05166 539 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 APOA4P06727 396 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 F7P08709 466 aaPredicted RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 GSTM1P09488 218 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 GPR89BP0CG08 455 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 AOC1P19801 751 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 MAT2AP31153 395 aaKnown RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 HOXA6P31267 233 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 CDKN2DP55273 166 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 GSTM4Q03013 218 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 INPP5AQ14642 412 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 CCDC153Q494R4 210 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 KYAT3Q6YP21 454 aaKnown RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 CMC1Q7Z7K0 106 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 TP53I13Q8NBR0 393 aaPredicted RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 CENPTQ96BT3 561 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 WDR26Q9H7D7 661 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 TMPRSS11EQ9UL52 423 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 CNOT6Q9ULM6 557 aaKnown RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 RUVBL2Q9Y230 463 aaKnown RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 DHRS7Q9Y394 339 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 HS3ST3A1Q9Y663 406 aa15.07■□□□□ 0
TRIM28-209ENST00000597423 OAS3Q9Y6K5 1087 aaKnown RBP15.07■□□□□ 0
TRIM28-209ENST00000597423 CCDC189A1A4V9 331 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 TMEM221A6NGB7 291 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 M0R296 226 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CACNB4O00305 520 aaPredicted RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 AXIN1O15169 862 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 PHGDHO43175 533 aaKnown RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 GPR39O43194 453 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 TYROBPO43914 113 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CDK14O94921 469 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 KLHL2O95198 593 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 ASMTLO95671 621 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 HOXC4P09017 264 aaPredicted RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 LTA4HP09960 611 aaKnown RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 CREB1P16220 341 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 HNRNPA2B1P22626 353 aaKnown RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 TRIM23P36406 574 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 RGS4P49798 205 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 IL2P60568 153 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 IRF4Q15306 451 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 PPM1JQ5JR12 505 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CTSL3PQ5NE16 218 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 HHATQ5VTY9 493 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 OTOAQ7RTW8 1153 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CEP97Q8IW35 865 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CLDN19Q8N6F1 224 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 PNPLA1Q8N8W4 532 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 ACVR1CQ8NER5 493 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 CADM4Q8NFZ8 388 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 FAM174AQ8TBP5 190 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 TCP10LQ8TDR4 215 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 KLK6Q92876 244 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 OLFM1Q99784 485 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 BOCQ9BWV1 1114 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 TEX101Q9BY14 249 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 NMRAL1Q9HBL8 299 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 LATS2Q9NRM7 1088 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 INTS9Q9NV88 658 aaKnown RBP15.06■□□□□ 0
TRIM28-209ENST00000597423 C2orf42Q9NWW7 574 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 MID2Q9UJV3 735 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 GPR34Q9UPC5 381 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 PLLPQ9Y342 182 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
TRIM28-209ENST00000597423 EYSQ5T1H1 3165 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 CCDC163A0A0D9SF12 145 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 KLHL33A6NCF5 533 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 PRAMEF26H0Y7S4 382 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 MAP3K13O43283 966 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 LATO43561 262 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 FSBPO95073 299 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 RBP1P09455 135 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 SLC35E2BP0CK96 405 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 CCDC166P0CW27 439 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 CBSLP0DN79 551 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 KELP23276 732 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 DGKAP23743 735 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 RPA3P35244 121 aaPredicted RBP15.05■□□□□ -0
TRIM28-209ENST00000597423 CBSP35520 551 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 ATP6V0D1P61421 351 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 CDK3Q00526 305 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 IL9RQ01113 521 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 FGL2Q14314 439 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 LRRC8EQ6NSJ5 796 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 MICALCLQ6ZW33 695 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 HEATR4Q86WZ0 1026 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 ANKRD42Q8N9B4 389 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 SREK1Q8WXA9 508 aaKnown RBP15.05■□□□□ -0
TRIM28-209ENST00000597423 SGF29Q96ES7 293 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 COX14Q96I36 57 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 GPR21Q99679 349 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 CCM2Q9BSQ5 444 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 GPR174Q9BXC1 333 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 RMI1Q9H9A7 625 aa15.05■□□□□ -0
TRIM28-209ENST00000597423 SARS2Q9NP81 518 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms