RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GALNT13Q8IUC8 556 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 GRAMD2AQ8IUY3 354 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CCDC117Q8IWD4 279 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 GOLM1Q8NBJ4 401 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 BHLHE22Q8NFJ8 381 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 HCAR2Q8TDS4 363 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ADAMTS19Q8TE59 1207 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ZNF486Q96H40 463 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 RMND5AQ9H871 391 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CROCCQ5TZA2 2017 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 LOC100653049A0A140TA62 436 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ILVBLA1L0T0 632 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 LCHNA4D1U4 455 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ZNF839A8K0R7 811 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 M0QX08 132 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 PSMD11O00231 422 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 NRG2O14511 850 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 KRT34O76011 436 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 VAPBO95292 243 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CXCL14O95715 111 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 EN2P19622 333 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 ARNTP27540 789 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 KRT6CP48668 564 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 TPTEP56180 551 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 FPGSQ05932 587 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 TRAF2Q12933 501 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ZNF235Q14590 738 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ZNF846Q147U1 533 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 PPM1LQ5SGD2 360 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 SLX4IPQ5VYV7 408 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 BNC2Q6ZN30 1099 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 UBE2Q1Q7Z7E8 422 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CLEC14AQ86T13 490 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ZC3HC1Q86WB0 502 aaKnown RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 HS6ST3Q8IZP7 471 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 PHTF2Q8N3S3 785 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 KLHL32Q96NJ5 620 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 GPR22Q99680 433 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 SEMA3CQ99985 751 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 SPON2Q9BUD6 331 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 RHOJQ9H4E5 214 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ARNT2Q9HBZ2 717 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 FBXO9Q9UK97 447 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 INSL6Q9Y581 213 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 A0A1B0GVM2 712 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TCAF2A6NFQ2 919 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 HTRA2O43464 458 aaPredicted RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 SCO2O43819 266 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 GREM1O60565 184 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZMPSTE24O75844 475 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 OLFM2O95897 454 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 RHOCP08134 193 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 CCNA2P20248 432 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 CXCR2P25025 360 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 GABRR2P28476 465 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 HPCAL1P37235 193 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 HADHAP40939 763 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TMBIM6P55061 237 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 KLF10Q13118 480 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 LILRA6Q6PI73 481 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 CHST9Q7L1S5 443 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ANKRD13BQ86YJ7 626 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 RAVER1Q8IY67 606 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 FAM47BQ8NA70 645 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TUBA1CQ9BQE3 449 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 POLR1EQ9GZS1 481 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 MARCH7Q9H992 704 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZNF195O14628 629 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 NUAK1O60285 661 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 BCL10O95999 233 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 AHSGP02765 367 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZNF182P17025 639 aaPredicted RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 IDUAP35475 653 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 BMPR1AP36894 532 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ARCN1P48444 511 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 C1QTNF8P60827 252 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ABCE1P61221 599 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 MS4A2Q01362 244 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZNF177Q13360 481 aaPredicted RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 CTBP1Q13363 440 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 USP10Q14694 798 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 NHSL2Q5HYW2 709 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 CXorf57Q6NSI4 855 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 TMC8Q8IU68 726 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 DENND6AQ8IWF6 608 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZC3H7AQ8IWR0 971 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TMA16Q96EY4 203 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 ZNF599Q96NL3 588 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 LRRC3Q9BY71 257 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 NAA50Q9GZZ1 169 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 TP63Q9H3D4 680 aaPredicted RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 NMRAL1Q9HBL8 299 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms