RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 A6NCN8 305 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 NUDT21O43809 227 aaKnown RBP21.6■■□□□ 1.05
HOMER3-206ENST00000594439 CDK16Q00536 496 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 CAMK2BQ13554 666 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 LAMB3Q13751 1172 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 KCNJ11Q14654 390 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 SKIDA1Q1XH10 827 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 GPR33Q49SQ1 333 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 TSTD2Q5T7W7 516 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 NXPE1Q8N323 547 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 DCBLD1Q8N8Z6 715 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 GRK7Q8WTQ7 553 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 KLC4Q9NSK0 619 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 LRIT1Q9P2V4 623 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 CRLS1Q9UJA2 301 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 CLCA2Q9UQC9 943 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 TCAF1Q9Y4C2 921 aa21.6■■□□□ 1.05
HOMER3-206ENST00000594439 PNLIPP16233 465 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 MSH3P20585 1137 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 AKT1P31749 480 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 CDKN1CP49918 316 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-206ENST00000594439 SESN2P58004 480 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-206ENST00000594439 B4GALNT1Q00973 533 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 TARDBPQ13148 414 aaKnown RBP eCLIP21.59■■□□□ 1.05
HOMER3-206ENST00000594439 INSCQ1MX18 579 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 TMEM220Q6QAJ8 160 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 TRAPPC5Q8IUR0 188 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 OR13J1Q8NGT2 312 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 CCDC97Q96F63 343 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-206ENST00000594439 DDX47Q9H0S4 455 aaKnown RBP21.59■■□□□ 1.05
HOMER3-206ENST00000594439 SLC2A6Q9UGQ3 507 aa21.59■■□□□ 1.05
HOMER3-206ENST00000594439 NTN3O00634 580 aaPredicted RBP21.58■■□□□ 1.05
HOMER3-206ENST00000594439 SNX2O60749 519 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 PRSS56P0CW18 603 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 NPY2RP49146 381 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 TERF1P54274 439 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 ACVR1Q04771 509 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 ZRANB3Q5FWF4 1079 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 ANKRD22Q5VYY1 191 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 LRRC8BQ6P9F7 803 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 NLRP9Q7RTR0 991 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 ZNF438Q7Z4V0 828 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 SFRP1Q8N474 314 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 SLC37A2Q8TED4 501 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 CPT1BQ92523 772 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 ZNF778Q96MU6 729 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 DNAJC16Q9Y2G8 782 aa21.58■■□□□ 1.05
HOMER3-206ENST00000594439 CHD8Q9HCK8 2581 aa21.58■■□□□ 1.04
HOMER3-206ENST00000594439 AKAP13Q12802 2813 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 TPRP12270 2363 aaKnown RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 TRBV23OR9-2A0A075B6M9 112 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 A0A1W2PQM1 296 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CCDC162PA2VCL2 907 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 OR2AG2A6NM03 316 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 C1QTNF9BB2RNN3 333 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 AP3B1O00203 1094 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PPM1DO15297 605 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 SGTAO43765 313 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 POP7O75817 140 aaKnown RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 C1QTNF9P0C862 333 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 F3P13726 295 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CCL7P80098 99 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CACNG1Q06432 222 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 NR1D2Q14995 579 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PCID2Q5JVF3 399 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 IYDQ6PHW0 289 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 DET1Q7L5Y6 550 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 SPRED1Q7Z699 444 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 SERPINA9Q86WD7 417 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CCNJLQ8IV13 435 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PIANPQ8IYJ0 282 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 Q8N9G6 341 aaPredicted RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PPHLN1Q8NEY8 458 aaKnown RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 WDR48Q8TAF3 677 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 NAT14Q8WUY8 206 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 SLCO2A1Q92959 643 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PEX13Q92968 403 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 SGF29Q96ES7 293 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 ZNF514Q96K75 400 aaPredicted RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CNTNAP3BQ96NU0 1288 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 COPS8Q99627 209 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 CNTNAP3Q9BZ76 1288 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 OSGEPL1Q9H4B0 414 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PRDM8Q9NQV8 689 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 ZDHHC3Q9NYG2 299 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 BFARQ9NZS9 450 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 PCYOX1Q9UHG3 505 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 DNMT3AQ9Y6K1 912 aaPredicted RBP21.57■■□□□ 1.04
HOMER3-206ENST00000594439 UNC13CQ8NB66 2214 aa21.57■■□□□ 1.04
HOMER3-206ENST00000594439 IGLV3-16A0A075B6K0 115 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 OR51F1A6NGY5 319 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 RHPN2P1A8MT19 583 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 KCNJ13O60928 360 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 TCEA3O75764 348 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 TMEM63AO94886 807 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 RPLP0P05388 317 aaKnown RBP21.56■■□□□ 1.04
HOMER3-206ENST00000594439 ACRV1P26436 265 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 FOXN2P32314 431 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 FASLGP48023 281 aa21.56■■□□□ 1.04
HOMER3-206ENST00000594439 ETF1P62495 437 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms