RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RAB15P59190 212 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 FKBP1BP68106 108 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 TIGD2Q4W5G0 525 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 COQ5Q5HYK3 327 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 TMTC4Q5T4D3 741 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 KCTD8Q6ZWB6 473 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 SPATA19Q7Z5L4 167 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 OR7D4Q8NG98 312 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 OR2T11Q8NH01 316 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 FUBP3Q96I24 572 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIG1-206ENST00000594067 HGH1Q9BTY7 390 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 INTS10Q9NVR2 710 aaKnown RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 NLE1Q9NVX2 485 aaPredicted RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 NOD1Q9Y239 953 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 ZFC3H1O60293 1989 aaKnown RBP16.35■□□□□ 0.21
LIG1-206ENST00000594067 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
LIG1-206ENST00000594067 CCDC154A6NI56 674 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 PRR35P0CG20 571 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 C21orf59P57076 290 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 YBEYP58557 167 aaPredicted RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 BNIP3Q12983 259 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 RCAN2Q14206 197 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 PTPRNQ16849 979 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 HABP4Q5JVS0 413 aaKnown RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 OGFOD2Q6N063 350 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 DCDC5Q6ZRR9 648 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 CHST15Q7LFX5 561 aaPredicted RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 DHRSXQ8N5I4 330 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 TRIB3Q96RU7 358 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 SEPHS2Q99611 448 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 PDFQ9HBH1 243 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 INTS7Q9NVH2 962 aaKnown RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 ASB1Q9Y576 335 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 SLC22A3O75751 556 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 C1RP00736 705 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 ZNF12P17014 697 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 TACR2P21452 398 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 UGT1A1P22309 533 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 UGT1A4P22310 534 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 RFC2P35250 354 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 UGT1A3P35503 534 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 UGT1A5P35504 534 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 CAPGP40121 348 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 CCR3P51677 355 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 ZNF140P52738 457 aaPredicted RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 RELAQ04206 551 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 ANKRD26P1Q6NSI1 321 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 FAM117BQ6P1L5 589 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 GLT6D1Q7Z4J2 308 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 KIAA2013Q8IYS2 634 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 LGI2Q8N0V4 545 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 SIDT2Q8NBJ9 832 aaKnown RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 MDGA1Q8NFP4 955 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
LIG1-206ENST00000594067 SEZ6LQ9BYH1 1024 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 CCSER2Q9H7U1 834 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 ANAPC2Q9UJX6 822 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 PCTPQ9UKL6 214 aa16.34■□□□□ 0.21
LIG1-206ENST00000594067 SNX2O60749 519 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 ZBTB11O95625 1053 aaPredicted RBP16.33■□□□□ 0.21
LIG1-206ENST00000594067 ESRRBO95718 433 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 IL12AP29459 219 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.21
LIG1-206ENST00000594067 KCNQ1P51787 676 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 BMXP51813 675 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 DDHD1Q8NEL9 900 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 ZBED2Q9BTP6 218 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 SPON2Q9BUD6 331 aa16.33■□□□□ 0.21
LIG1-206ENST00000594067 SMPD3Q9NY59 655 aaPredicted RBP16.33■□□□□ 0.21
LIG1-206ENST00000594067 FUOMA2VDF0 154 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 SYCE1LA8MT33 242 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 OR1I1O60431 355 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 NIPSNAP2O75323 286 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 EEDO75530 441 aaKnown RBP16.33■□□□□ 0.2
LIG1-206ENST00000594067 CHEK2O96017 543 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 UROSP10746 265 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 MAPKAPK2P49137 400 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
LIG1-206ENST00000594067 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
LIG1-206ENST00000594067 ILF2Q12905 390 aaKnown RBP16.33■□□□□ 0.2
LIG1-206ENST00000594067 MOGQ16653 247 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 CTXN3Q4LDR2 81 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 USP51Q70EK9 711 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 TERB1Q8NA31 727 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 ACDQ96AP0 544 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 CDK15Q96Q40 435 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 CYP2S1Q96SQ9 504 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 SPC25Q9HBM1 224 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 C8orf4Q9NR00 106 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 EIF2B4Q9UI10 523 aaKnown RBP16.33■□□□□ 0.2
LIG1-206ENST00000594067 COQ6Q9Y2Z9 468 aa16.33■□□□□ 0.2
LIG1-206ENST00000594067 SNAP91O60641 907 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 OR4F21O95013 312 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms