RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PRKCQQ04759 706 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 ZBTB16Q05516 673 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 NLRP8Q86W28 1048 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 TRIM42Q8IWZ5 723 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 PELI3Q8N2H9 469 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 NAT14Q8WUY8 206 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 GLYATL1Q969I3 302 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 FAM107BQ9H098 131 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 ARHGEF3Q9NR81 526 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 CA14Q9ULX7 337 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 PLRG1O43660 514 aaKnown RBP20.56■□□□□ 0.88
PNKP-203ENST00000593946 CHRNB1P11230 501 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 NEFHP12036 1026 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 CD1DP15813 335 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 KCNA4P22459 653 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 C10orf107Q8IVU9 208 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 NKAPQ8N5F7 415 aaKnown RBP20.56■□□□□ 0.88
PNKP-203ENST00000593946 LKAAEAR1Q8TD35 194 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 SIPA1Q96FS4 1042 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 MRGPRX1Q96LB2 322 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 DERL2Q9GZP9 239 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 FGFR1OP2Q9NVK5 253 aa20.56■□□□□ 0.88
PNKP-203ENST00000593946 TSPAN12O95859 305 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 RBP1P09455 135 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 ATP1B2P14415 290 aaPredicted RBP20.55■□□□□ 0.88
PNKP-203ENST00000593946 CHI3L2Q15782 390 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 TTC31Q49AM3 519 aaPredicted RBP20.55■□□□□ 0.88
PNKP-203ENST00000593946 KHDC1Q4VXA5 237 aaKnown RBP20.55■□□□□ 0.88
PNKP-203ENST00000593946 LDLRAP1Q5SW96 308 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 ZYG11AQ6WRX3 759 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 CPLX4Q7Z7G2 160 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 GANCQ8TET4 914 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 SARS2Q9NP81 518 aaKnown RBP20.55■□□□□ 0.88
PNKP-203ENST00000593946 SLCO1B3Q9NPD5 702 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 KCTD5Q9NXV2 234 aa20.55■□□□□ 0.88
PNKP-203ENST00000593946 IGLON5A6NGN9 336 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 CFAP99D6REC4 459 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 K7ESM1 405 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 ZBTB14O43829 449 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 TM7SF2O76062 418 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 PCDH8O95206 1070 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 SLC25A14O95258 325 aaPredicted RBP20.54■□□□□ 0.88
PNKP-203ENST00000593946 MYL2P10916 166 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 FGF3P11487 239 aaPredicted RBP20.54■□□□□ 0.88
PNKP-203ENST00000593946 TFEBP19484 476 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 AKT1P31749 480 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 AGERQ15109 404 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 CRY1Q16526 586 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 CES4AQ5XG92 561 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 Q6ZS52 159 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 USP30Q70CQ3 517 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 ISCA2Q86U28 154 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 PTERQ96BW5 349 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 DCUN1D1Q96GG9 259 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 LATS2Q9NRM7 1088 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 CNOT6Q9ULM6 557 aaKnown RBP20.54■□□□□ 0.88
PNKP-203ENST00000593946 FZD4Q9ULV1 537 aa20.54■□□□□ 0.88
PNKP-203ENST00000593946 NDUFAB1O14561 156 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 EDF1O60869 148 aaKnown RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 MTX2O75431 263 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 RALBP11234 206 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 NDUFV2P19404 249 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 ADPRHP54922 357 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 FAM47EQ6ZV65 393 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 PHYKPLQ8IUZ5 450 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 ZNF473Q8WTR7 871 aaKnown RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 INPP5DQ92835 1189 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 NSRP1Q9H0G5 558 aaKnown RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 OXSMQ9NWU1 459 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 WNT16Q9UBV4 365 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 MBD1Q9UIS9 605 aaPredicted RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 KRBA1A5PL33 1030 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 TRIM16O95361 564 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 OR56A5P0C7T3 313 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 MSH3P20585 1137 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 IL2P60568 153 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 BST1Q10588 318 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 ATG16L1Q676U5 607 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 SEL1L3Q68CR1 1132 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 RAET1GQ6H3X3 334 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 KBTBD6Q86V97 674 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 CPNE9Q8IYJ1 553 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 SYNPOQ8N3V7 929 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 OR6Y1Q8NGX8 325 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 OR14C36Q8NHC7 312 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 EEF1AKMT1Q8WVE0 214 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 PANX3Q96QZ0 392 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 PITPNM3Q9BZ71 974 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 ALG9Q9H6U8 611 aa20.53■□□□□ 0.88
PNKP-203ENST00000593946 SPATS2LQ9NUQ6 558 aaKnown RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 ZFR2Q9UPR6 939 aaKnown RBP20.53■□□□□ 0.88
PNKP-203ENST00000593946 TCRBV21S2A2A0A5A6 115 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 C19orf67A6NJJ6 358 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 SGTAO43765 313 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 AP2A2O94973 939 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 ITGB6P18564 788 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 TARSP26639 723 aaKnown RBP20.52■□□□□ 0.88
PNKP-203ENST00000593946 GPR1P46091 355 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 ATP6V0D1P61421 351 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 KIAA1161Q6NSJ0 714 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms