RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRAM1L1Q8N609 369 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 GLYATL1Q969I3 302 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 HAUS1Q96CS2 278 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 FCRL5Q96RD9 977 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 SLC12A9Q9BXP2 914 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 KCNK6Q9Y257 313 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ANKRD17O75179 2603 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 C9orf172C9J069 976 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
H3F3B-213ENST00000593254 CHUKO15111 745 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 GRID2O43424 1007 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 SLC25A14O95258 325 aaPredicted RBP13.03□□□□□ -0.32
H3F3B-213ENST00000593254 EPOP01588 193 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF8P17098 575 aaPredicted RBP13.03□□□□□ -0.32
H3F3B-213ENST00000593254 CD82P27701 267 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 CSF2RBP32927 897 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 HMGCLP35914 325 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 ETV5P41161 510 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 CASRP41180 1078 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 CLCNKAP51800 687 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 LIMK2P53671 638 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 GPLD1P80108 840 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 XRCC4Q13426 336 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 NOMO1Q15155 1222 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 IYDQ6PHW0 289 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 PHYKPLQ8IUZ5 450 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 OR4D9Q8NGE8 314 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 OXNAD1Q96HP4 312 aaPredicted RBP13.03□□□□□ -0.32
H3F3B-213ENST00000593254 MRGPRX2Q96LB1 330 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 PLEKHG4BQ96PX9 1271 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 DPYSL5Q9BPU6 564 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 HEMGNQ9BXL5 484 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 B3GNT4Q9C0J1 378 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 OR2AG1Q9H205 316 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 TRABDQ9H4I3 376 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 TRIM39Q9HCM9 518 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 SARS2Q9NP81 518 aaKnown RBP13.03□□□□□ -0.32
H3F3B-213ENST00000593254 KCNK4Q9NYG8 393 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 EFR3BQ9Y2G0 817 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 PCDHA3Q9Y5H8 950 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
H3F3B-213ENST00000593254 TRBV23OR9-2A0A075B6M9 112 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 AGRPO00253 132 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.33
H3F3B-213ENST00000593254 THRAP10827 490 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 F3P13726 295 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 PTPN7P35236 360 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 CHRNA4P43681 627 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 HHEXQ03014 270 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 MPP3Q13368 585 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
H3F3B-213ENST00000593254 C4orf17Q53FE4 359 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 SIRPB2Q5JXA9 342 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 ZNF648Q5T619 568 aaPredicted RBP13.02□□□□□ -0.33
H3F3B-213ENST00000593254 NKAIN2Q5VXU1 208 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 BORAQ6PGQ7 559 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 PID1Q7Z2X4 250 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 ZNF761Q86XN6 746 aaPredicted RBP13.02□□□□□ -0.33
H3F3B-213ENST00000593254 TTC30BQ8N4P2 665 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 FAM26EQ8N5C1 309 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 RCBTB1Q8NDN9 531 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 USP7Q93009 1102 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 VPS35Q96QK1 796 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 LACRTQ9GZZ8 138 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.33
H3F3B-213ENST00000593254 TRHDEQ9UKU6 1024 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 TMPRSS11EQ9UL52 423 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 PCDHB11Q9Y5F2 797 aa13.02□□□□□ -0.33
H3F3B-213ENST00000593254 CACNA1DQ01668 2161 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KIR2DS5A0A0G2JLQ3 304 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 A0A0G2JNG1 304 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 F5H423 210 aaPredicted RBP13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KIR2DS3K7RE56 304 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 PJA2O43164 708 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 CCL4P13236 92 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 SLC2A4P14672 509 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 HLA-DPA1P20036 260 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 CTNNA2P26232 953 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 RBL1P28749 1068 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
H3F3B-213ENST00000593254 VAV2P52735 878 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 MAPK10P53779 464 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 POLE2P56282 527 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KCNAB2Q13303 367 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KIR2DS5Q14953 304 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms