RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 AURKAO14965 403 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 CAPN5O15484 640 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 CBFA2T2O43439 604 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 CDK14O94921 469 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 NDST3O95803 873 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 PRKAR1AP10644 381 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 SLC19A1P41440 591 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 CCR10P46092 362 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 FOXM1Q08050 763 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 KCNAB2Q13303 367 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 SLC14A2Q15849 920 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 KHDC1Q4VXA5 237 aaKnown RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 TEX44Q53QW1 395 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 LRRC38Q5VT99 294 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 TMEM26Q6ZUK4 368 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 RHOT1Q8IXI2 618 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 C9orf72Q96LT7 481 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 TGM7Q96PF1 710 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 TIMM29Q9BSF4 260 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 NHEJ1Q9H9Q4 299 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 UCK1Q9HA47 277 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 DDX56Q9NY93 547 aaKnown RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 SAE1Q9UBE0 346 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 TMEM184BQ9Y519 407 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-207ENST00000593089 SLC30A1Q9Y6M5 507 aa20.16■□□□□ 0.82
TRIM47-207ENST00000593089 VEGFDO43915 354 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 UBXN7O94888 489 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 C9P02748 559 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 TPM1P09493 284 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 ANKRD34CP0C6C1 535 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 AMD1P17707 334 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 PTPN3P26045 913 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 RPL10P27635 214 aaKnown RBP20.15■□□□□ 0.82
TRIM47-207ENST00000593089 SEPHS1P49903 392 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 ABHD18Q0P651 414 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 MFSD7Q6UXD7 560 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 PTRH1Q86Y79 214 aaKnown RBP20.15■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF547Q8IVP9 402 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 GDAP1Q8TB36 358 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 TEKT5Q96M29 485 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 CATSPER2Q96P56 530 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 EFHD1Q9BUP0 239 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 SIDT1Q9NXL6 827 aaKnown RBP20.15■□□□□ 0.82
TRIM47-207ENST00000593089 TRIM10Q9UDY6 481 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 TMPRSS11EQ9UL52 423 aa20.15■□□□□ 0.82
TRIM47-207ENST00000593089 TLN1Q9Y490 2541 aaKnown RBP20.15■□□□□ 0.82
TRIM47-207ENST00000593089 MFAP3LO75121 409 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 DLGAP3O95886 979 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 SLC1A1P43005 524 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 DRG2P55039 364 aaKnown RBP20.14■□□□□ 0.81
TRIM47-207ENST00000593089 CDC20Q12834 499 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 PRKD1Q15139 912 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-207ENST00000593089 NOMO1Q15155 1222 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 LLGL1Q15334 1064 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 VPS35Q96QK1 796 aa20.14■□□□□ 0.81
TRIM47-207ENST00000593089 SRPK1Q96SB4 655 aaKnown RBP20.14■□□□□ 0.81
TRIM47-207ENST00000593089 TRIT1Q9H3H1 467 aaKnown RBP20.14■□□□□ 0.81
TRIM47-207ENST00000593089 OR52A4PA6NMU1 304 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 F5H423 210 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-207ENST00000593089 SPOPO43791 374 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 BRAFP15056 766 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 PECAM1P16284 738 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-207ENST00000593089 NFKB1P19838 968 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 COMTP21964 271 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 IDSP22304 550 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 CD68P34810 354 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-207ENST00000593089 LEPRP48357 1165 aaKnown RBP20.13■□□□□ 0.81
TRIM47-207ENST00000593089 ATP13A5Q4VNC0 1218 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 KAZNQ674X7 775 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 C16orf46Q6P387 395 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 ABRAXAS1Q6UWZ7 409 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 TRAPPC5Q8IUR0 188 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 VSTM4Q8IW00 320 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 ESX1Q8N693 406 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 TFB1MQ8WVM0 346 aaKnown RBP20.13■□□□□ 0.81
TRIM47-207ENST00000593089 RSC1A1Q92681 617 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 CXorf40BQ96DE9 158 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 ANP32EQ9BTT0 268 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 ULBP3Q9BZM4 244 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 POT1Q9NUX5 634 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 SPTA1P02549 2419 aa20.13■□□□□ 0.81
TRIM47-207ENST00000593089 PRR19A6NJB7 356 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 CST8O60676 142 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 RASSF9O75901 435 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 ZNF28P17035 718 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 OAS2P29728 719 aaKnown RBP20.12■□□□□ 0.81
TRIM47-207ENST00000593089 CDKN2BP42772 138 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 NR2C2P49116 596 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 SH3BP2P78314 561 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 TLE1Q04724 770 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 TMEM115Q12893 351 aaPredicted RBP20.12■□□□□ 0.81
TRIM47-207ENST00000593089 GTF2H3Q13889 308 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 TFDP2Q14188 446 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 GPR18Q14330 331 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 ATP1A1-AS1Q5TC04 95 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 BZW1Q7L1Q6 419 aaKnown RBP20.12■□□□□ 0.81
TRIM47-207ENST00000593089 C11orf96Q7Z7L8 435 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 SLC25A41Q8N5S1 370 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 STARD8Q92502 1023 aa20.12■□□□□ 0.81
TRIM47-207ENST00000593089 TTC25Q96NG3 672 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms