RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RFX6Q8HWS3 928 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 CNGA4Q8IV77 575 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 TFB1MQ8WVM0 346 aaKnown RBP18.59■□□□□ 0.57
CCDC43-205ENST00000592333 JPH3Q8WXH2 748 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-205ENST00000592333 CHP1Q99653 195 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 PRDM8Q9NQV8 689 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 HACD3Q9P035 362 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 FAM153AQ9UHL3 310 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 MYO18BQ8IUG5 2567 aa18.58■□□□□ 0.57
CCDC43-205ENST00000592333 LOC285095A0A1B0GVY8 99 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 A8MU76 341 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 PSTPIP1O43586 416 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 ZIC2O95409 532 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 BPIP17213 487 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 IDSP22304 550 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 PTPN3P26045 913 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 CDKN2BP42772 138 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 CCR10P46092 362 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 IL11RAQ14626 422 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 PCSK7Q16549 785 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 SNAP47Q5SQN1 464 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 PRICKLE2Q7Z3G6 844 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 RNF25Q96BH1 459 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 C9orf72Q96LT7 481 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 OSGEPL1Q9H4B0 414 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 GPN2Q9H9Y4 310 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 SIDT1Q9NXL6 827 aaKnown RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 EPHA6Q9UF33 1036 aa18.58■□□□□ 0.56
CCDC43-205ENST00000592333 DNMT3AQ9Y6K1 912 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-205ENST00000592333 TERTO14746 1132 aaKnown RBP18.57■□□□□ 0.56
CCDC43-205ENST00000592333 UBXN7O94888 489 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 MT-CYBP00156 380 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-205ENST00000592333 SLC19A1P41440 591 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 CYP4F2P78329 520 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 ALS2CLQ60I27 953 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 NPNTQ6UXI9 565 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 KDELC2Q7Z4H8 507 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 TRIM48Q8IWZ4 208 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 ESX1Q8N693 406 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 SPATA22Q8NHS9 363 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 TBC1D10AQ9BXI6 508 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 CEP41Q9BYV8 373 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 ZCCHC2Q9C0B9 1178 aaKnown RBP18.57■□□□□ 0.56
CCDC43-205ENST00000592333 SLC40A1Q9NP59 571 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 SPTLC3Q9NUV7 552 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 ZNF624Q9P2J8 865 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-205ENST00000592333 SLC23A2Q9UGH3 650 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 IL17BQ9UHF5 180 aa18.57■□□□□ 0.56
CCDC43-205ENST00000592333 KLHL33A6NCF5 533 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 SPOPO43791 374 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 STK17BO94768 372 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 DLGAP3O95886 979 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 PIRTP0C851 137 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 DMPKQ09013 629 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 TMEM115Q12893 351 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-205ENST00000592333 GTF2H3Q13889 308 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 CLCA4Q14CN2 919 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 MFSD7Q6UXD7 560 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 ZNF547Q8IVP9 402 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 P3H4Q92791 437 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 FCRL5Q96RD9 977 aa18.56■□□□□ 0.56
CCDC43-205ENST00000592333 ZNF768Q9H5H4 540 aaKnown RBP18.56■□□□□ 0.56
CCDC43-205ENST00000592333 GOLGA6L3A6NEY3 463 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 PDZK1P1A8MUH7 402 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 HACD1B0YJ81 288 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 CST8O60676 142 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 PMPCBO75439 489 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 AMD1P17707 334 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 HLA-DPA1P20036 260 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 COMTP21964 271 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 MAPK9P45984 424 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 POLE2P56282 527 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 MPP3Q13368 585 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 TFDP3Q5H9I0 405 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 LDLRAP1Q5SW96 308 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 CRTC3Q6UUV7 619 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 KDELC1Q6UW63 502 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 PRSS42Q7Z5A4 293 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 C11orf96Q7Z7L8 435 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 RCOR2Q8IZ40 523 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 ZDHHC12Q96GR4 267 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 TTC25Q96NG3 672 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 OGFRQ9NZT2 677 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 SCHIP1Q9P0W5 487 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-205ENST00000592333 TRHDEQ9UKU6 1024 aa18.55■□□□□ 0.56
CCDC43-205ENST00000592333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCDC43-205ENST00000592333 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 RECKO95980 971 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 BRAFP15056 766 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 CD68P34810 354 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 STAT5AP42229 794 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 HALP42357 657 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 CAPZBP47756 277 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 WNT3AP56704 352 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 DYNLT1P63172 113 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 WASHC5Q12768 1159 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 KCNAB2Q13303 367 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 ITGA9Q13797 1035 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms