RNA–Protein interactions for RNA: ENST00000592172.5

RFX2-218, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-218	ENST00000592172	KCNAB1	Q14722	419 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	PAFAH1B3	Q15102	231 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	ZNF569	Q5MCW4	686 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	FAM182A	Q5T1J6	154 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	PWWP2B	Q6NUJ5	590 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	IRGC	Q6NXR0	463 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	GPR26	Q8NDV2	337 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	CCHCR1	Q8TD31	782 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	TRIM11	Q96F44	468 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	MLPH	Q9BV36	600 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	BRD8	Q9H0E9	1235 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	ISCU	Q9H1K1	167 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	TRIM39	Q9HCM9	518 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	SLC40A1	Q9NP59	571 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	AIPL1	Q9NZN9	384 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	CHMP5	Q9NZZ3	219 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	MAP4K5	Q9Y4K4	846 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	CREBBP	Q92793	2442 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	LRBA	P50851	2863 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	SHANK1	Q9Y566	2161 aa		13.55	□□□□□ -0.24
RFX2-218	ENST00000592172	CRYBG3	Q68DQ2	2970 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	IGHV5-51	A0A0C4DH38	117 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	ANKRD66	B4E2M5	251 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	C21orf140	B9A014	251 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	KMO	O15229	486 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	MTX2	O75431	263 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	SORBS2	O94875	1100 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	MT-ND3	P03897	115 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	PIRT	P0C851	137 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	FOLR1	P15328	257 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	CCNC	P24863	283 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	PRKCI	P41743	596 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	CD86	P42081	329 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	ARSE	P51690	589 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	PGD	P52209	483 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	DRG2	P55039	364 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	KLHL30	Q0D2K2	578 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	IL10RA	Q13651	578 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	DPYSL3	Q14195	570 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	GALNT3	Q14435	633 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	PIGH	Q14442	188 aa	Predicted RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	IFI16	Q16666	785 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	UGT8	Q16880	541 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	ATP13A4	Q4VNC1	1196 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	KHDC1	Q4VXA5	237 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	PRR30	Q53SZ7	412 aa	Predicted RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	CCDC122	Q5T0U0	273 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	TIGD7	Q6NT04	549 aa	Predicted RBP	13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	ZNF547	Q8IVP9	402 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	NIPA2	Q8N8Q9	360 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	FAM71B	Q8TC56	605 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	FATE1	Q969F0	183 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	ZDHHC12	Q96GR4	267 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	TSGA13	Q96PP4	275 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	SLC25A23	Q9BV35	468 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	LMBRD1	Q9NUN5	540 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	POT1	Q9NUX5	634 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	TRIM10	Q9UDY6	481 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	EPHA6	Q9UF33	1036 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	AMACR	Q9UHK6	382 aa		13.54	□□□□□ -0.24
RFX2-218	ENST00000592172	SLC4A1	P02730	911 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	PTPN4	P29074	926 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	CCL11	P51671	97 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	TUBB3	Q13509	450 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	LAMB3	Q13751	1172 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ABRAXAS1	Q6UWZ7	409 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	CERS6	Q6ZMG9	384 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	LRRTM4	Q86VH4	590 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	CPNE8	Q86YQ8	564 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	GLYATL1	Q969I3	302 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	CXorf40B	Q96DE9	158 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	SLC41A2	Q96JW4	573 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	TIMM29	Q9BSF4	260 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ZSCAN5A	Q9BUG6	496 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ZFYVE1	Q9HBF4	777 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	PDE7B	Q9NP56	450 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	MLXIPL	Q9NP71	852 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ANO10	Q9NW15	660 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	SEMA5B	Q9P283	1151 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ANAPC7	Q9UJX3	599 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	RARRES3	Q9UL19	164 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	SHOC2	Q9UQ13	582 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	WDR37	Q9Y2I8	494 aa		13.53	□□□□□ -0.24
RFX2-218	ENST00000592172	ESPL1	Q14674	2120 aa		13.52	□□□□□ -0.24
RFX2-218	ENST00000592172	ARGFX	A6NJG6	315 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	GPR89A	B7ZAQ6	455 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	JCHAIN	P01591	159 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	EBLN1	P0CF75	366 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	GPR89B	P0CG08	455 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	COL8A1	P27658	744 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	GJC1	P36383	396 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	SSR1	P43307	286 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	DCDC1	P59894	354 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	GBE1	Q04446	702 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	SLC10A2	Q12908	348 aa	Predicted RBP	13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	MRPL49	Q13405	166 aa	Known RBP	13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	CCDC183	Q5T5S1	534 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	AGAP9	Q5VTM2	703 aa		13.52	□□□□□ -0.25
RFX2-218	ENST00000592172	ZNF787	Q6DD87	383 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms