RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TMEM63AO94886 807 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 MT-CO3P00414 261 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 JUPP14923 745 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 ZNF7P17097 686 aaPredicted RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 MSNP26038 577 aaKnown RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 PBLDP30039 288 aaPredicted RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 RPIAP49247 311 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 OR1D5P58170 312 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 CDH17Q12864 832 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 NFATC2Q13469 925 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 CAMK2BQ13554 666 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 KCNJ11Q14654 390 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 ZDHHC20Q5W0Z9 365 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 TMEM220Q6QAJ8 160 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 CES3Q6UWW8 571 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 XKR5Q6UX68 686 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 FAM83HQ6ZRV2 1179 aaPredicted RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 LINC00523Q86TU6 105 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 TRAPPC5Q8IUR0 188 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 DDHD1Q8NEL9 900 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 OR13J1Q8NGT2 312 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 DTX3LQ8TDB6 740 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 SLC37A2Q8TED4 501 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 GLMNQ92990 594 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 SGF29Q96ES7 293 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 OSGEPL1Q9H4B0 414 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 RMI1Q9H9A7 625 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 SMOXQ9NWM0 555 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 LRIT1Q9P2V4 623 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 ATXN7L1Q9ULK2 861 aaPredicted RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 A0A1W2PNU3 283 aaPredicted RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 TRABD2BA6NFA1 517 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CES2O00748 559 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 VEGFDO43915 354 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 PPFIA2O75334 1257 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 POP7O75817 140 aaKnown RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 GP1BAP07359 652 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TCP1P17987 556 aaKnown RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 PSMA3P25788 255 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 MGAT1P26572 445 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 AKT1P31749 480 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 PTGIRP43119 386 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 E2F1Q01094 437 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 ITGA9Q13797 1035 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 SEPT7Q16181 437 aaKnown RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 ZRANB3Q5FWF4 1079 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 LDLRAP1Q5SW96 308 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 FNBP1LQ5T0N5 605 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TSTD2Q5T7W7 516 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 NKAIN2Q5VXU1 208 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TAS2R42Q7RTR8 314 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TMPRSS9Q7Z410 1059 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 B3GNT8Q7Z7M8 397 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 LRRTM4Q86VH4 590 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 SERPINA9Q86WD7 417 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TMPRSS12Q86WS5 348 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 KLHL7Q8IXQ5 586 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 NXPE1Q8N323 547 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 MPP5Q8N3R9 675 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 LILRA3Q8N6C8 439 aaPredicted RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 STYXQ8WUJ0 223 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CPT1BQ92523 772 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 HDAC10Q969S8 669 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 LRRC45Q96CN5 670 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 NAP1L3Q99457 506 aaPredicted RBP11.35□□□□□ -0.59
VMP1-211ENST00000591315 ABCG4Q9H172 646 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CHRAC1Q9NRG0 131 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 KCND1Q9NSA2 647 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 SYBUQ9NX95 663 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 FAM8A1Q9UBU6 413 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CRLS1Q9UJA2 301 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 APPL1Q9UKG1 709 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CLCA2Q9UQC9 943 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 WDR37Q9Y2I8 494 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TCAF1Q9Y4C2 921 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 SAR1BQ9Y6B6 198 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 CACNA1BQ00975 2339 aa11.35□□□□□ -0.59
VMP1-211ENST00000591315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 TRBV5-4A0A0C4DH59 114 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 CTAGE9A4FU28 777 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 AGAP14A8MT82 685 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 KMOO15229 486 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 CSO75390 466 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 RPLP0P05388 317 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 BRAFP15056 766 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 GLB1P16278 677 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 TPSB2P20231 275 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 MSH3P20585 1137 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 ITGALP20701 1170 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 ADRA1DP25100 572 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 RPL10P27635 214 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 NMBRP28336 390 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 FOXN2P32314 431 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 PDX1P52945 283 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 DRG2P55039 364 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms