RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 PSTPIP1O43586 416 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 CDK14O94921 469 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 AMD1P17707 334 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 NR2C2P49116 596 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 CLCNKAP51800 687 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 GFERP55789 205 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 GTF2H3Q13889 308 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 KHDC1Q4VXA5 237 aaKnown RBP20.13■□□□□ 0.81
TOP3A-219ENST00000584887 PLXDC1Q8IUK5 500 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 TRAPPC5Q8IUR0 188 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 KIAA1143Q96AT1 154 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-219ENST00000584887 RNF31Q96EP0 1072 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 SRPK1Q96SB4 655 aaKnown RBP20.13■□□□□ 0.81
TOP3A-219ENST00000584887 SLC12A9Q9BXP2 914 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 GPN2Q9H9Y4 310 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-219ENST00000584887 APMAPQ9HDC9 416 aa20.13■□□□□ 0.81
TOP3A-219ENST00000584887 VEGFDO43915 354 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 RPL10P27635 214 aaKnown RBP20.12■□□□□ 0.81
TOP3A-219ENST00000584887 CD68P34810 354 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-219ENST00000584887 MAGEA1P43355 309 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 CHRNA4P43681 627 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 WASHC5Q12768 1159 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 CLCA4Q14CN2 919 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 TMEM26Q6ZUK4 368 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 NLGN4XQ8N0W4 816 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 IPMKQ8NFU5 416 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 NLGN4YQ8NFZ3 816 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-219ENST00000584887 P3H4Q92791 437 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 TGM7Q96PF1 710 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 TIMM29Q9BSF4 260 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 TRIM4Q9C037 500 aa20.12■□□□□ 0.81
TOP3A-219ENST00000584887 ZNF891A8MT65 544 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-219ENST00000584887 MTSS1O43312 755 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 SFTPCP11686 197 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 SLC19A1P41440 591 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 DRG2P55039 364 aaKnown RBP20.11■□□□□ 0.81
TOP3A-219ENST00000584887 FOXM1Q08050 763 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 ATP13A5Q4VNC0 1218 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 TFDP3Q5H9I0 405 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 SIRPB2Q5JXA9 342 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 KDELC1Q6UW63 502 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 PID1Q7Z2X4 250 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 ZNF547Q8IVP9 402 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 UNC5BQ8IZJ1 945 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 BLOC1S5Q8TDH9 187 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 CXorf40BQ96DE9 158 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 TTC25Q96NG3 672 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 STARD5Q9NSY2 213 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 ZNF624Q9P2J8 865 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-219ENST00000584887 PILRAQ9UKJ1 303 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 TMPRSS11EQ9UL52 423 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 ALG6Q9Y672 507 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 SLC30A1Q9Y6M5 507 aa20.11■□□□□ 0.81
TOP3A-219ENST00000584887 MN1Q10571 1320 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-219ENST00000584887 OR52A4PA6NMU1 304 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 POLR1CO15160 346 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-219ENST00000584887 BUD23O43709 281 aaKnown RBP20.1■□□□□ 0.81
TOP3A-219ENST00000584887 RASSF9O75901 435 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 STK17BO94768 372 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 UBXN7O94888 489 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 PRKAR1AP10644 381 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 VCLP18206 1134 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-219ENST00000584887 IDSP22304 550 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 MARCKSL1P49006 195 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 SEPHS1P49903 392 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 ADCY2Q08462 1091 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 TAZQ16635 292 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 BORAQ6PGQ7 559 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 FAM151BQ6UXP7 276 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 ZPBPQ9BS86 351 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 UCK1Q9HA47 277 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 FBXO8Q9NRD0 319 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 OGFRQ9NZT2 677 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 TFR2Q9UP52 801 aa20.1■□□□□ 0.81
TOP3A-219ENST00000584887 SETXQ7Z333 2677 aaKnown RBP20.1■□□□□ 0.81
TOP3A-219ENST00000584887 hCG_1818297A0A087WSY0 165 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 PPFIA2O75334 1257 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 ZRANB2O95218 330 aaKnown RBP eCLIP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 ITGB6P18564 788 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 MAP4P27816 1152 aaKnown RBP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 HMGCLP35914 325 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 SPAM1P38567 509 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 LEPRP48357 1165 aaKnown RBP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 TMEM115Q12893 351 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 CHRNA6Q15825 494 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 PPP2R5EQ16537 467 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 CCDC181Q5TID7 509 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 GLT6D1Q7Z4J2 308 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 ZNF567Q8N184 647 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 TTC30BQ8N4P2 665 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 OXNAD1Q96HP4 312 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 C9orf72Q96LT7 481 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 QKIQ96PU8 341 aaKnown RBP eCLIP20.09■□□□□ 0.81
TOP3A-219ENST00000584887 VPS35Q96QK1 796 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 HEMGNQ9BXL5 484 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 FSD1LQ9BXM9 530 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 TRABDQ9H4I3 376 aa20.09■□□□□ 0.81
TOP3A-219ENST00000584887 IL26Q9NPH9 171 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms