RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SFTPA2Q8IWL1 248 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 LRRN4Q8WUT4 740 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 USP7Q93009 1102 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 COX14Q96I36 57 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 SMIM14Q96QK8 99 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 CMKLR1Q99788 373 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 FAM83DQ9H4H8 585 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 RMI1Q9H9A7 625 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 VPS18Q9P253 973 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 TMEM98Q9Y2Y6 226 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 LOXL2Q9Y4K0 774 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 C9orf172C9J069 976 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 INPP4BO15327 924 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 PSTPIP1O43586 416 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 PDGFAP04085 211 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 ALDH4A1P30038 563 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 NR2C2P49116 596 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 DYNLT1P63172 113 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 TFDP2Q14188 446 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 PYCR3Q53H96 274 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 PHF19Q5T6S3 580 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 HENMT1Q5T8I9 393 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 MARK2Q7KZI7 788 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 TAOK1Q7L7X3 1001 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 GDF7Q7Z4P5 450 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 TRIM74Q86UV6 250 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 SLITRK4Q8IW52 837 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 NAGSQ8N159 534 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 CNTD1Q8N815 330 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 APOBEC4Q8WW27 367 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 AGAP3Q96P47 875 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 CATSPER2Q96P56 530 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 OLFM3Q96PB7 478 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 SRPK1Q96SB4 655 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 AGAP2Q99490 1192 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 DPYSL5Q9BPU6 564 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 SLC25A51Q9H1U9 297 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 ZFYVE1Q9HBF4 777 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
CCDC47-206ENST00000584112 RAD18Q9NS91 495 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 ZNHIT2Q9UHR6 403 aa11.01□□□□□ -0.65
CCDC47-206ENST00000584112 A0A0A6YYK5 440 aaPredicted RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 B4GAT1O43505 415 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 WIPF1O43516 503 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 TNNT1P13805 278 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 CD99P14209 185 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 SLC2A4P14672 509 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 COMTP21964 271 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 MAPK10P53779 464 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 OR1D5P58170 312 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 GPLD1P80108 840 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 GALNT3Q14435 633 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 AMZ1Q400G9 498 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 ZNF569Q5MCW4 686 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 CCDC70Q6NSX1 233 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 SARM1Q6SZW1 724 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 MFSD7Q6UXD7 560 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 NPNTQ6UXI9 565 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 CXXC5Q7LFL8 322 aaKnown RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 LYSMD3Q7Z3D4 306 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 PATE1Q8WXA2 126 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 NKD1Q969G9 470 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 TRIB3Q96RU7 358 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 ZSCAN5AQ9BUG6 496 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 CEP41Q9BYV8 373 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 TRIM5Q9C035 493 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 B3GNT4Q9C0J1 378 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 STN1Q9H668 368 aaKnown RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 RDH14Q9HBH5 336 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 MAGEE1Q9HCI5 957 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 ST14Q9Y5Y6 855 aa11□□□□□ -0.65
CCDC47-206ENST00000584112 NSD1Q96L73 2696 aaPredicted RBP11□□□□□ -0.65
CCDC47-206ENST00000584112 ZNF891A8MT65 544 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 FADS2P1A8MWK0 482 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 PRSS44E7EML9 344 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 HGSO14964 777 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 DNAJC6O75061 913 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 ATP1A1P05023 1023 aaKnown RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 SNRPB2P08579 225 aaKnown RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CD82P27701 267 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 OAS2P29728 719 aaKnown RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CDKN2BP42772 138 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 MAGEA1P43355 309 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 TNNT3P45378 269 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-206ENST00000584112 FASLGP48023 281 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 DCDC1P59894 354 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CDK18Q07002 472 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 SQSTM1Q13501 440 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 TRA2AQ13595 282 aaKnown RBP eCLIP10.99□□□□□ -0.653e-9■□□□□ 10.9
CCDC47-206ENST00000584112 TEX44Q53QW1 395 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 ATP1A1-AS1Q5TC04 95 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 PDPK2PQ6A1A2 396 aa10.99□□□□□ -0.65
CCDC47-206ENST00000584112 CHST15Q7LFX5 561 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms