RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PIRTP0C851 137 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CCNCP24863 283 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 RPL10P27635 214 aaKnown RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 RPS18P62269 152 aaKnown RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 GBE1Q04446 702 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CHAF1BQ13112 559 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 SEMA5AQ13591 1074 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 GPR18Q14330 331 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 IFI16Q16666 785 aaKnown RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 ATP13A4Q4VNC1 1196 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 KHDC1Q4VXA5 237 aaKnown RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CCDC122Q5T0U0 273 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CACHD1Q5VU97 1274 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 IRGCQ6NXR0 463 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 ZNF547Q8IVP9 402 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CPT1CQ8TCG5 803 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 CCHCR1Q8TD31 782 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 KLHL6Q8WZ60 621 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 FATE1Q969F0 183 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 TSGA13Q96PP4 275 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 MLPHQ9BV36 600 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 NUP85Q9BW27 656 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 AKIRIN1Q9H9L7 192 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-221ENST00000583080 AMACRQ9UHK6 382 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 SHOC2Q9UQ13 582 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 SHANK1Q9Y566 2161 aa15.89■□□□□ 0.13
SREBF1-221ENST00000583080 TTLL8A6PVC2 850 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 VPS4BO75351 444 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 ZNF7P17097 686 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-221ENST00000583080 SSR1P43307 286 aaKnown RBP15.88■□□□□ 0.13
SREBF1-221ENST00000583080 DRG2P55039 364 aaKnown RBP15.88■□□□□ 0.13
SREBF1-221ENST00000583080 KCNAB1Q14722 419 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 NADK2Q4G0N4 442 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 PPP1R3BQ86XI6 285 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
SREBF1-221ENST00000583080 EFCAB3Q8N7B9 438 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 GLYATL1Q969I3 302 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 TRIM39Q9HCM9 518 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 SLC40A1Q9NP59 571 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 POT1Q9NUX5 634 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 TRIM10Q9UDY6 481 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 IP6K2Q9UHH9 426 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 PADI1Q9ULC6 663 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 VPS4AQ9UN37 437 aa15.88■□□□□ 0.13
SREBF1-221ENST00000583080 GPR89AB7ZAQ6 455 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 KCNK1O00180 336 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 SEMA7AO75326 666 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 CCNYL3P0C7X3 344 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 GPR89BP0CG08 455 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 NELFEP18615 380 aaKnown RBP15.87■□□□□ 0.13
SREBF1-221ENST00000583080 DCDC1P59894 354 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 SLC10A2Q12908 348 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-221ENST00000583080 ZBTB17Q13105 803 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 TUBB3Q13509 450 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 IL10RAQ13651 578 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 FHL5Q5TD97 284 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 PWWP2BQ6NUJ5 590 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 FAM199XQ6PEV8 388 aaPredicted RBP15.87■□□□□ 0.13
SREBF1-221ENST00000583080 CERS6Q6ZMG9 384 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 LRRTM4Q86VH4 590 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 TRAM1L1Q8N609 369 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 PQLC3Q8N755 202 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 GALNT11Q8NCW6 608 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 TRIB3Q96RU7 358 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 TIMM29Q9BSF4 260 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 ZSCAN5AQ9BUG6 496 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 CEP41Q9BYV8 373 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 ZFYVE1Q9HBF4 777 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 WDR37Q9Y2I8 494 aa15.87■□□□□ 0.13
SREBF1-221ENST00000583080 IGHV5-51A0A0C4DH38 117 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 C21orf140B9A014 251 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 KMOO15229 486 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 JCHAINP01591 159 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 FOLR1P15328 257 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 LAMB3Q13751 1172 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 PRR30Q53SZ7 412 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-221ENST00000583080 HGSNATQ68CP4 663 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 ABRAXAS1Q6UWZ7 409 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 CNTD1Q8N815 330 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 GPR150Q8NGU9 434 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 SSC4DQ8WTU2 575 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 HDAC11Q96DB2 347 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 CXorf40BQ96DE9 158 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 ZNF670Q9BS34 389 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 HAUS2Q9NVX0 235 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 NFKBIL1Q9UBC1 381 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-221ENST00000583080 EPHA6Q9UF33 1036 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 TMPRSS11EQ9UL52 423 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 ZNF711Q9Y462 761 aa15.86■□□□□ 0.13
SREBF1-221ENST00000583080 MED13Q9UHV7 2174 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 SORBS2O94875 1100 aaKnown RBP15.85■□□□□ 0.13
SREBF1-221ENST00000583080 RECKO95980 971 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 MT-ND3P03897 115 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 CYP1A2P05177 515 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 EBLN1P0CF75 366 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 PGDP52209 483 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 TAS2R40P59535 323 aa15.85■□□□□ 0.13
SREBF1-221ENST00000583080 UGT8Q16880 541 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms