RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ACVR1CQ8NER5 493 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 PRSS33Q8NF86 280 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 EPS8L3Q8TE67 593 aaKnown RBP9.42□□□□□ -0.9
RFFL-210ENST00000582308 SGF29Q96ES7 293 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 KLHDC7BQ96G42 594 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 DCUN1D1Q96GG9 259 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 BIRC8Q96P09 236 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 ZIM3Q96PE6 472 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 RBBP8Q99708 897 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 CCDC77Q9BR77 488 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 OR2AG1Q9H205 316 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 P2RY12Q9H244 342 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 RHOJQ9H4E5 214 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 PILRBQ9UKJ0 227 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
RFFL-210ENST00000582308 PCYT1BQ9Y5K3 369 aaPredicted RBP9.42□□□□□ -0.9
RFFL-210ENST00000582308 ARID1BQ8NFD5 2236 aaPredicted RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ATXN2Q99700 1313 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 TLR4O00206 839 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 DYNC1I1O14576 645 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 PFDN6O15212 129 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 NUAK1O60285 661 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CDK14O94921 469 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ASMTLO95671 621 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 INHBAP08476 426 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 THEGLP0DJG4 465 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 RALBP11234 206 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZNF7P17097 686 aaPredicted RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 RPS3P23396 243 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFFL-210ENST00000582308 NSG1P42857 185 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 SLCO1A2P46721 670 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CSNK1EP49674 416 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 ADARP55265 1226 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 TIAL1Q01085 375 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZNF844Q08AG5 666 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 LPAL2Q16609 132 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CTSL3PQ5NE16 218 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 RBM20Q5T481 1227 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 TMEM220Q6QAJ8 160 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ADGRD1Q6QNK2 874 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 MACC1Q6ZN28 852 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 HDXQ7Z353 690 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 SPATS2Q86XZ4 545 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 TDRPQ86YL5 185 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZNF547Q8IVP9 402 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 HEXDCQ8WVB3 486 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 OR1E3Q8WZA6 343 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 PIGKQ92643 395 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZBTB9Q96C00 473 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 ATXN7L3BQ96GX2 97 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 VPS39Q96JC1 886 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 WDR92Q96MX6 357 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 NDNQ99608 321 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 AARSD1Q9BTE6 412 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CLPBQ9H078 707 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CAAP1Q9H8G2 361 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 FGF22Q9HCT0 170 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 MRPL40Q9NQ50 206 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZNF446Q9NWS9 450 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 EURLQ9NYK6 297 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 TXNDC16Q9P2K2 825 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 CTNNAL1Q9UBT7 734 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 SLC24A2Q9UI40 661 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 ZNF180Q9UJW8 692 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 PNMA8BQ9ULN7 279 aaPredicted RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 SLC17A4Q9Y2C5 497 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 MED16Q9Y2X0 877 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 MTO1Q9Y2Z2 717 aaKnown RBP9.41□□□□□ -0.9
RFFL-210ENST00000582308 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
RFFL-210ENST00000582308 GOLGA4Q13439 2230 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 SPTY2D1-AS1A0A0U1RR47 76 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 A0A1B0GTW7 788 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 TLDC2A0PJX2 215 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PRSS38A1L453 326 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 SMIM23A6NLE4 172 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 OR2AG2A6NM03 316 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 IQCF5A8MTL0 148 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 CFAP99D6REC4 459 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 TNFRSF10CO14798 259 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 CHUKO15111 745 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 VILLO15195 856 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 DNAJC6O75061 913 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 NIPSNAP2O75323 286 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 SASH3O75995 380 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 AP2A2O94973 939 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ESR1P03372 595 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 IVLP07476 585 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ITGA2BP08514 1039 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PKMP14618 531 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 KELP23276 732 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 SPRP35270 261 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 SERPINB9P50453 376 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms