RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 EFCAB1Q9HAE3 211 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 ZFP14Q9HCL3 533 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 DYRK4Q9NR20 520 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 NFKBIL1Q9UBC1 381 aaPredicted RBP11.01□□□□□ -0.65
SKA2-204ENST00000578519 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
SKA2-204ENST00000578519 OBSL1O75147 1896 aa11□□□□□ -0.65
SKA2-204ENST00000578519 NEMP2A6NFY4 417 aa11□□□□□ -0.65
SKA2-204ENST00000578519 NPIPB15A6NHN6 443 aaPredicted RBP11□□□□□ -0.65
SKA2-204ENST00000578519 NEMP1O14524 444 aa11□□□□□ -0.65
SKA2-204ENST00000578519 OR1I1O60431 355 aa11□□□□□ -0.65
SKA2-204ENST00000578519 TM7SF2O76062 418 aa11□□□□□ -0.65
SKA2-204ENST00000578519 FTH1P02794 183 aa11□□□□□ -0.65
SKA2-204ENST00000578519 ENO2P09104 434 aaPredicted RBP11□□□□□ -0.65
SKA2-204ENST00000578519 PRSS56P0CW18 603 aa11□□□□□ -0.65
SKA2-204ENST00000578519 UROSP10746 265 aa11□□□□□ -0.65
SKA2-204ENST00000578519 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
SKA2-204ENST00000578519 VCLP18206 1134 aa11□□□□□ -0.65
SKA2-204ENST00000578519 MSH3P20585 1137 aa11□□□□□ -0.65
SKA2-204ENST00000578519 EPHA3P29320 983 aa11□□□□□ -0.65
SKA2-204ENST00000578519 EEF1DP29692 281 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 ARRB2P32121 409 aa11□□□□□ -0.65
SKA2-204ENST00000578519 GKP32189 559 aa11□□□□□ -0.65
SKA2-204ENST00000578519 PGGT1BP53609 377 aa11□□□□□ -0.65
SKA2-204ENST00000578519 PTSQ03393 145 aa11□□□□□ -0.65
SKA2-204ENST00000578519 ART3Q13508 389 aa11□□□□□ -0.65
SKA2-204ENST00000578519 UBAP2LQ14157 1087 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 CBX2Q14781 532 aaPredicted RBP11□□□□□ -0.65
SKA2-204ENST00000578519 SHHQ15465 462 aa11□□□□□ -0.65
SKA2-204ENST00000578519 OR4D1Q15615 310 aa11□□□□□ -0.65
SKA2-204ENST00000578519 TSNQ15631 228 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 FNDC3BQ53EP0 1204 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 ARSIQ5FYB1 569 aa11□□□□□ -0.65
SKA2-204ENST00000578519 ATAT1Q5SQI0 421 aa11□□□□□ -0.65
SKA2-204ENST00000578519 LDLRAP1Q5SW96 308 aa11□□□□□ -0.65
SKA2-204ENST00000578519 VWA5B1Q5TIE3 1220 aa11□□□□□ -0.65
SKA2-204ENST00000578519 PPP2R2DQ66LE6 453 aa11□□□□□ -0.65
SKA2-204ENST00000578519 SULT1C3Q6IMI6 304 aa11□□□□□ -0.65
SKA2-204ENST00000578519 SPATA19Q7Z5L4 167 aa11□□□□□ -0.65
SKA2-204ENST00000578519 GPR149Q86SP6 731 aa11□□□□□ -0.65
SKA2-204ENST00000578519 TREML1Q86YW5 311 aa11□□□□□ -0.65
SKA2-204ENST00000578519 CPNE9Q8IYJ1 553 aa11□□□□□ -0.65
SKA2-204ENST00000578519 TRAM1L1Q8N609 369 aa11□□□□□ -0.65
SKA2-204ENST00000578519 FAM13CQ8NE31 585 aa11□□□□□ -0.65
SKA2-204ENST00000578519 FRS2Q8WU20 508 aa11□□□□□ -0.65
SKA2-204ENST00000578519 FUBP1Q96AE4 644 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 MAGEB10Q96LZ2 347 aaPredicted RBP11□□□□□ -0.65
SKA2-204ENST00000578519 ASB16Q96NS5 453 aa11□□□□□ -0.65
SKA2-204ENST00000578519 HGH1Q9BTY7 390 aa11□□□□□ -0.65
SKA2-204ENST00000578519 ZSCAN5AQ9BUG6 496 aa11□□□□□ -0.65
SKA2-204ENST00000578519 SPATA16Q9BXB7 569 aa11□□□□□ -0.65
SKA2-204ENST00000578519 MRPL1Q9BYD6 325 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 SHCBP1LQ9BZQ2 653 aa11□□□□□ -0.65
SKA2-204ENST00000578519 RDH14Q9HBH5 336 aa11□□□□□ -0.65
SKA2-204ENST00000578519 MID1IP1Q9NPA3 183 aa11□□□□□ -0.65
SKA2-204ENST00000578519 SMOXQ9NWM0 555 aa11□□□□□ -0.65
SKA2-204ENST00000578519 B4GALT6Q9UBX8 382 aa11□□□□□ -0.65
SKA2-204ENST00000578519 PRPF19Q9UMS4 504 aaKnown RBP11□□□□□ -0.65
SKA2-204ENST00000578519 OARD1Q9Y530 152 aa11□□□□□ -0.65
SKA2-204ENST00000578519 ANGPTL3Q9Y5C1 460 aa11□□□□□ -0.65
SKA2-204ENST00000578519 DENND4CQ5VZ89 1909 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 NPEPPSL1A6NEC2 478 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 HEPACAM2A8MVW5 462 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 GRXCR1A8MXD5 290 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 C1QTNF3-AMACRE9PGA6 284 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 H0Y858 1186 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 CDC7O00311 574 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 SDHDO14521 159 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 NPC1O15118 1278 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 SLC16A5O15375 505 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 TULP3O75386 442 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 LEFTY1O75610 366 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 C8GP07360 202 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 RPS17P08708 135 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 HIST1H2AGP0C0S8 130 aaPredicted RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 MPC1LP0DKB6 136 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 MTHFD2P13995 350 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 UGT1A6P19224 532 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 HIST1H2ADP20671 130 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 UGT1A1P22309 533 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 UGT1A4P22310 534 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 PIK3R1P27986 724 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 AKT1P31749 480 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 UGT1A3P35503 534 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 UGT1A5P35504 534 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 EIF2DP41214 584 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 BTKQ06187 659 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 CUL3Q13618 768 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 RPS6KA2Q15349 733 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 PCBP2Q15366 365 aaKnown RBP eCLIP10.99□□□□□ -0.653e-12■■■■■ 44.1
SKA2-204ENST00000578519 RBBP7Q16576 425 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 FAM78AQ5JUQ0 283 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 PLEKHS1Q5SXH7 462 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 RARS2Q5T160 578 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 CES5AQ6NT32 575 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 TMEM184AQ6ZMB5 413 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 NEK10Q6ZWH5 1172 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms