RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 AIMP1Q12904 312 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 ITGA7Q13683 1181 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SLC29A2Q14542 456 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 RCN1Q15293 331 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SEC23BQ15437 767 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ALX1Q15699 326 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SLC18A3Q16572 532 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 TRMT5Q32P41 509 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 ZC2HC1CQ53FD0 456 aaPredicted RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 AWAT1Q58HT5 328 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ACSBG2Q5FVE4 666 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 KIAA1755Q5JYT7 1200 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 TMTC4Q5T4D3 741 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 MAP3K21Q5TCX8 1036 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ARL6IP4Q66PJ3 421 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 ZNF280DQ6N043 979 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 AAGABQ6PD74 315 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 KLHL35Q6PF15 583 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 C16orf87Q6PH81 154 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 C1orf228Q6PIY5 440 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 RANBP10Q6VN20 620 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PACS1Q6VY07 963 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 MEPCEQ7L2J0 689 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 CHST3Q7LGC8 479 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 NANOGNBQ7Z5D8 188 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 NET1Q7Z628 596 aaPredicted RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 PHLDB2Q86SQ0 1253 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PIP4P1Q86T03 277 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PATL1Q86TB9 770 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 ANKRD13BQ86YJ7 626 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 KLHL7Q8IXQ5 586 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 YAF2Q8IY57 180 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SYCE1Q8N0S2 351 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ARHGAP24Q8N264 748 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 RIBC1Q8N443 379 aaPredicted RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 DDI1Q8WTU0 396 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SCFD1Q8WVM8 642 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 C10orf82Q8WW14 230 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CTNNBL1Q8WYA6 563 aaPredicted RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 CASP10Q92851 521 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ATP6V0A1Q93050 837 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 P2RX5Q93086 422 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ERP27Q96DN0 273 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 EDC3Q96F86 508 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 EPSTI1Q96J88 318 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ZBTB45Q96K62 511 aaPredicted RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 CNOT6LQ96LI5 555 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 HS6ST2Q96MM7 605 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 ZMAT2Q96NC0 199 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 BTBD9Q96Q07 612 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 TGS1Q96RS0 853 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 CCT7Q99832 543 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SH3GL1Q99961 368 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 BTBD10Q9BSF8 475 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SPZ1Q9BXG8 430 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CADM1Q9BY67 442 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 LRRC27Q9C0I9 530 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 NYXQ9GZU5 481 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CLK4Q9HAZ1 481 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 USP29Q9HBJ7 922 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PLGRKTQ9HBL7 147 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PALMDQ9NP74 551 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 UBN1Q9NPG3 1134 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 PFDN4Q9NQP4 134 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 UBAP1Q9NZ09 502 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 COL20A1Q9P218 1284 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CHPF2Q9P2E5 772 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 MTRF1LQ9UGC7 380 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 RASAL2Q9UJF2 1139 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CCPG1Q9ULG6 757 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 NENFQ9UMX5 172 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 NIP7Q9Y221 180 aaKnown RBP eCLIP3.66□□□□□ -1.82
DDX42-205ENST00000577978 HBS1LQ9Y450 684 aaKnown RBP3.66□□□□□ -1.82
DDX42-205ENST00000577978 PCDHB2Q9Y5E7 798 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 FRYQ5TBA9 3013 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 CEP295Q9C0D2 2601 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 RLFQ13129 1914 aa3.66□□□□□ -1.82
DDX42-205ENST00000577978 SPTA1P02549 2419 aa3.65□□□□□ -1.82
DDX42-205ENST00000577978 COL4A4P53420 1690 aaPredicted RBP3.65□□□□□ -1.82
DDX42-205ENST00000577978 CCDC187A0A096LP49 1063 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 TMEM120BA0PK00 339 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 LRRC53A6NM62 1247 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 PRR23D1E9PI22 279 aaPredicted RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 SPECC1L-ADORA2AF8WAN1 911 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 EIF3FO00303 357 aaPredicted RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 PRPF4O43172 522 aaKnown RBP eCLIP3.65□□□□□ -1.83
DDX42-205ENST00000577978 DENRO43583 198 aaKnown RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 TIMM44O43615 452 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 BUB1O43683 1085 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 BUD23O43709 281 aaKnown RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 EDF1O60869 148 aaKnown RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 RNASEH1O60930 286 aaKnown RBP3.65□□□□□ -1.83
DDX42-205ENST00000577978 TULP3O75386 442 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 KRT36O76013 467 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 BAIAP3O94812 1187 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 GGPS1O95749 300 aa3.65□□□□□ -1.83
DDX42-205ENST00000577978 IL1BP01584 269 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms