RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SLC30A1Q9Y6M5 507 aa19.05■□□□□ 0.64
SS18-208ENST00000577751 GOLGA6L10A0A0M3HER8 536 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 CTAGE9A4FU28 777 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 AP3B1O00203 1094 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 KCNJ13O60928 360 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 TCEA3O75764 348 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 ITGALP20701 1170 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 CTSCP53634 463 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 ACVR1Q04771 509 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 GPS1Q13098 491 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 KCNJ11Q14654 390 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 TRIP13Q15645 432 aaPredicted RBP19.04■□□□□ 0.64
SS18-208ENST00000577751 SKIDA1Q1XH10 827 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 IYDQ6PHW0 289 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 UNQ6494/PRO21346Q6UXR6 183 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 NXPE1Q8N323 547 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 SFRP1Q8N474 314 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 OR13J1Q8NGT2 312 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 PEX13Q92968 403 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 CNTNAP3BQ96NU0 1288 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 CNTNAP3Q9BZ76 1288 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 FAM96AQ9H5X1 160 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 DNMT3AQ9Y6K1 912 aaPredicted RBP19.04■□□□□ 0.64
SS18-208ENST00000577751 ASPMQ8IZT6 3477 aa19.04■□□□□ 0.64
SS18-208ENST00000577751 A0A1W2PQM1 296 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 TCRBV7S3A2A0A539 114 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 C1QTNF9BB2RNN3 333 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 PPM1DO15297 605 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 C1QTNF9P0C862 333 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 F3P13726 295 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 MSH3P20585 1137 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 FASLGP48023 281 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 NPY2RP49146 381 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 VPS41P49754 854 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 CDKN1CP49918 316 aaPredicted RBP19.03■□□□□ 0.64
SS18-208ENST00000577751 ARSDP51689 593 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 B4GALNT1Q00973 533 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 INSCQ1MX18 579 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 TSTD2Q5T7W7 516 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 TMEM220Q6QAJ8 160 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 MICALCLQ6ZW33 695 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 ZNF534Q76KX8 674 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 TRAPPC5Q8IUR0 188 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 SLC37A2Q8TED4 501 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 GRK7Q8WTQ7 553 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 HEXDCQ8WVB3 486 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 ZNF514Q96K75 400 aaPredicted RBP19.03■□□□□ 0.64
SS18-208ENST00000577751 ZNF778Q96MU6 729 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 CRLS1Q9UJA2 301 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 TCAF1Q9Y4C2 921 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 AKAP13Q12802 2813 aa19.03■□□□□ 0.64
SS18-208ENST00000577751 IGLV3-16A0A075B6K0 115 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CCDC78A2IDD5 438 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 TRABD2BA6NFA1 517 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 OR5K4A6NMS3 321 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 SGTAO43765 313 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CAPNS1P04632 268 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 AKT1P31749 480 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CCL7P80098 99 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CACNG1Q06432 222 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 DMPKQ09013 629 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 PLA2G4EQ3MJ16 856 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 PCID2Q5JVF3 399 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.02■□□□□ 0.64
SS18-208ENST00000577751 LRRC8BQ6P9F7 803 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 ABRAXAS1Q6UWZ7 409 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 NLRP9Q7RTR0 991 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 SPRED1Q7Z699 444 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 CCNJLQ8IV13 435 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 C17orf53Q8N3J3 647 aaPredicted RBP19.02■□□□□ 0.64
SS18-208ENST00000577751 CPT1BQ92523 772 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 SLCO2A1Q92959 643 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 SGF29Q96ES7 293 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 DEPDC7Q96QD5 511 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 IL22Q9GZX6 179 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 DDX47Q9H0S4 455 aaKnown RBP19.02■□□□□ 0.64
SS18-208ENST00000577751 LRRN3Q9H3W5 708 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 PRDM8Q9NQV8 689 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 ZDHHC3Q9NYG2 299 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 SLC2A6Q9UGQ3 507 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 PCYOX1Q9UHG3 505 aa19.02■□□□□ 0.64
SS18-208ENST00000577751 WDFY3Q8IZQ1 3526 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 CEP295Q9C0D2 2601 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 TRBV23OR9-2A0A075B6M9 112 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 KIR2DS5A0A0G2JLQ3 304 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 A0A0G2JNG1 304 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 CCDC162PA2VCL2 907 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 OR2AG2A6NM03 316 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 KIR2DS3K7RE56 304 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 B4GAT1O43505 415 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 SNX2O60749 519 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 POP7O75817 140 aaKnown RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 RPLP0P05388 317 aaKnown RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 PRSS56P0CW18 603 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 SLC2A4P14672 509 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 ACRV1P26436 265 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 FOXN2P32314 431 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 GPR3P46089 330 aa19.01■□□□□ 0.63
SS18-208ENST00000577751 SESN2P58004 480 aaPredicted RBP19.01■□□□□ 0.63
SS18-208ENST00000577751 KIR2DS5Q14953 304 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms