RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GCSAMQ8N6F7 178 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 TRPC4APQ8TEL6 797 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 SLC44A1Q8WWI5 657 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 TM9SF4Q92544 642 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 PHF21AQ96BD5 680 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 LINGO1Q96FE5 620 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 PIP5K1AQ99755 562 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 TMEM39BQ9GZU3 492 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 CCDC177Q9NQR7 707 aaPredicted RBP2.29□□□□□ -2.04
TOP2A-202ENST00000577541 CWC15Q9P013 229 aaKnown RBP2.29□□□□□ -2.04
TOP2A-202ENST00000577541 MARCH4Q9P2E8 410 aaPredicted RBP2.29□□□□□ -2.04
TOP2A-202ENST00000577541 OR14J1Q9UGF5 321 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 FBXW11Q9UKB1 542 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 MKLN1Q9UL63 735 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 CLIC4Q9Y696 253 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 MAU2Q9Y6X3 613 aa2.29□□□□□ -2.04
TOP2A-202ENST00000577541 KRTAP16-1A8MUX0 517 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 SMIM1B2RUZ4 78 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 TSHBP01222 138 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PYGLP06737 847 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PRSS56P0CW18 603 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 GNB3P16520 340 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 MCCP23508 829 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PSMA4P25789 261 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 MAPK9P45984 424 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 CTCFP49711 727 aaPredicted RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 CTSCP53634 463 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ACVR2BQ13705 512 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF805Q5CZA5 627 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 NSUN5P2Q63ZY6 315 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 FAM53AQ6NSI3 398 aaPredicted RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PLXDC2Q6UX71 529 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ATF7IPQ6VMQ6 1270 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PIWIL4Q7Z3Z4 852 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 TRPT1Q86TN4 253 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 MAP7D3Q8IWC1 876 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 SMAP1Q8IYB5 467 aaPredicted RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PM20D2Q8IYS1 436 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 TMEM116Q8NCL8 245 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 RBM15BQ8NDT2 890 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 OR1J2Q8NGS2 313 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 OR14L1PQ8NHC6 308 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 METTL6Q8TCB7 284 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 FCAMRQ8WWV6 532 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 RFFLQ8WZ73 363 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 INTS12Q96CB8 462 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 EGLN2Q96KS0 407 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 NEUROD6Q96NK8 337 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ZBTB20Q9HC78 741 aaPredicted RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 PREBQ9HCU5 417 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 UBN1Q9NPG3 1134 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ADPRHL2Q9NX46 363 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 TRMT1Q9NXH9 659 aaKnown RBP2.28□□□□□ -2.04
TOP2A-202ENST00000577541 STK39Q9UEW8 545 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 CAMK2AQ9UQM7 478 aa2.28□□□□□ -2.04
TOP2A-202ENST00000577541 ARHGEF40Q8TER5 1519 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 H0YIN7 160 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 SCAMP1O15126 338 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 NKX2-2O95096 273 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 CLEC3BP05452 202 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 IGHV4-38-2P0DP08 117 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 CDH2P19022 906 aaPredicted RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 ACADLP28330 430 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 PRCPP42785 496 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 PPM1FP49593 454 aaPredicted RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 TAS2R40P59535 323 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 TMEM115Q12893 351 aaPredicted RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 DCTN2Q13561 401 aaKnown RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 MVPQ14764 893 aaKnown RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 PNLIPRP3Q17RR3 467 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 PCGF3Q3KNV8 242 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 TSSK4Q6SA08 328 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 RAD9BQ6WBX8 426 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 ARHGAP12Q8IWW6 846 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 SMC5Q8IY18 1101 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 CCDC13Q8IYE1 715 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 ADAD2Q8NCV1 583 aaKnown RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 HMGCLL1Q8TB92 370 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 LRR1Q96L50 414 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 LRMDAQ9H2I8 198 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 ERVMER34-1Q9H9K5 563 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 FAM120CQ9NX05 1096 aaKnown RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 MTMR10Q9NXD2 777 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 KLHL9Q9P2J3 617 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 FAF1Q9UNN5 650 aaPredicted RBP2.27□□□□□ -2.05
TOP2A-202ENST00000577541 CRYL1Q9Y2S2 319 aa2.27□□□□□ -2.05
TOP2A-202ENST00000577541 PRAG1Q86YV5 1406 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 A0A087X002 238 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 PLEKHD1A6NEE1 506 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 A6NLC8 198 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 EIF4E1BA6NMX2 242 aaKnown RBP2.26□□□□□ -2.05
TOP2A-202ENST00000577541 A8MU10 97 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 EIF3CLB5ME19 914 aaKnown RBP2.26□□□□□ -2.05
TOP2A-202ENST00000577541 NR5A2O00482 541 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 SLC25A12O75746 678 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 IPO7O95373 1038 aaKnown RBP2.26□□□□□ -2.05
TOP2A-202ENST00000577541 IGLV1-44P01699 117 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 ICAM1P05362 532 aa2.26□□□□□ -2.05
TOP2A-202ENST00000577541 HARS2P49590 506 aaKnown RBP2.26□□□□□ -2.05
TOP2A-202ENST00000577541 RARSP54136 660 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms