RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 AQP9O43315 295 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 GRID2O43424 1007 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 GDF9O60383 454 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 FUCA1P04066 466 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 ATP1B2P14415 290 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 DGKAP23743 735 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 PMLP29590 882 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 NSG1P42857 185 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 TTPAP49638 278 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 BNIP3Q12983 259 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 ELOCQ15369 112 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 SMAD1Q15797 465 aaKnown RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 PYCR3Q53H96 274 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 STPG1Q5TH74 334 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 STEAP4Q687X5 459 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 NEPROQ6NW34 567 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 CRTC3Q6UUV7 619 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 DET1Q7L5Y6 550 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 LRRTM4Q86VH4 590 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 TRAPPC5Q8IUR0 188 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 PALM2Q8IXS6 379 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 FSTL5Q8N475 847 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 RASGEF1AQ8N9B8 481 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF548Q8NEK5 533 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 GABPB2Q8TAK5 448 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 SAP25Q8TEE9 199 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF514Q96K75 400 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 LRRC61Q9BV99 259 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 TRNAU1APQ9NX07 287 aaKnown RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 IL1RAPL1Q9NZN1 696 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 MARCH4Q9P2E8 410 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-217ENST00000575711 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
RPAIN-217ENST00000575711 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 NEMP2A6NFY4 417 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 OR2AG2A6NM03 316 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 CHUKO15111 745 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 KMOO15229 486 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 OGNP20774 298 aaKnown RBP13.8□□□□□ -0.2
RPAIN-217ENST00000575711 ECHS1P30084 290 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 PI4KAP42356 2102 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 MAGEA4P43358 317 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 LIMK1P53667 647 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 ARHGAP8P85298 464 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 B4GALNT1Q00973 533 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 ILF3Q12906 894 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPAIN-217ENST00000575711 C1orf61Q13536 156 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 LRP8Q14114 963 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 SEMA3AQ14563 771 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 HSP90AA5PQ58FG0 334 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 ALYREFQ86V81 257 aaKnown RBP13.8□□□□□ -0.2
RPAIN-217ENST00000575711 KCNMB4Q86W47 210 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 GKN2Q86XP6 184 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 GATAD2AQ86YP4 633 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 SDR16C5Q8N3Y7 309 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 GPR150Q8NGU9 434 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 GSDMBQ8TAX9 411 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 NETO1Q8TDF5 533 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 UBXN4Q92575 508 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 CERS2Q96G23 380 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 FAM167BQ9BTA0 163 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 TMEM168Q9H0V1 697 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 CAAP1Q9H8G2 361 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 PPANQ9NQ55 473 aaKnown RBP13.8□□□□□ -0.2
RPAIN-217ENST00000575711 NFU1Q9UMS0 254 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 GPR34Q9UPC5 381 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 DOLKQ9UPQ8 538 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 PRKAB1Q9Y478 270 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 CSNK1G3Q9Y6M4 447 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 CACNA1EQ15878 2313 aa13.8□□□□□ -0.2
RPAIN-217ENST00000575711 F8W8V4 182 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 NDUFS3O75489 264 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 AP2A2O94973 939 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 GSTA2P09210 222 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 ERVK-10P10266 1014 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 ALPPL2P10696 532 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 ACP5P13686 325 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 CTSCP53634 463 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 TCEA2Q15560 299 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 INSCQ1MX18 579 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 TYSND1Q2T9J0 566 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 TMEM220Q6QAJ8 160 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 KANSL1Q7Z3B3 1105 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 LDB1Q86U70 411 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 CILP2Q8IUL8 1156 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 SCG3Q8WXD2 468 aaKnown RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 SGF29Q96ES7 293 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 C9orf72Q96LT7 481 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms