RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 HLA-DQB2P05538 268 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 BRAFP15056 766 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 DRG2P55039 364 aaKnown RBP19.51■□□□□ 0.71
CCDC40-206ENST00000572083 KRT81Q14533 505 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 INPP5JQ15735 1006 aaPredicted RBP19.51■□□□□ 0.71
CCDC40-206ENST00000572083 QPCTQ16769 361 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 CYB5D1Q6P9G0 228 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 ADGRG6Q86SQ4 1221 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 THAP4Q8WY91 577 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 SEC14L1Q92503 715 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 MAML1Q92585 1016 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 ING2Q9H160 280 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 HAUS4Q9H6D7 363 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 SLC40A1Q9NP59 571 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 MLXIPLQ9NP71 852 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 POT1Q9NUX5 634 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 TRIM10Q9UDY6 481 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 RARRES3Q9UL19 164 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 DOPEY1Q5JWR5 2465 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 HIVEP3Q5T1R4 2406 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 IGHV5-51A0A0C4DH38 117 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 LRRC53A6NM62 1247 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 MATN3O15232 486 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 CLDN1O95832 211 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 SLC4A1P02730 911 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 CD48P09326 243 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 FOLR1P15328 257 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 ZNF7P17097 686 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 CES1P23141 567 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 IL4RP24394 825 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 PTPN4P29074 926 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 DCTP40126 519 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 RPL26P61254 145 aaKnown RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 GALNT2Q10471 571 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 APTXQ7Z2E3 356 aaKnown RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 MAMDC2Q7Z304 686 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 ZNF571Q7Z3V5 609 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 LRRTM4Q86VH4 590 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 LRRC49Q8IUZ0 686 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 SIDT2Q8NBJ9 832 aaKnown RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 PRR7Q8TB68 274 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 TEKT4Q8WW24 435 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 EID2BQ96D98 161 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 CXorf40BQ96DE9 158 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 MLPHQ9BV36 600 aaPredicted RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 MFRPQ9BY79 579 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 TRIM39Q9HCM9 518 aa19.5■□□□□ 0.71
CCDC40-206ENST00000572083 RPL26L1Q9UNX3 145 aaKnown RBP19.5■□□□□ 0.71
CCDC40-206ENST00000572083 RGSL1A5PLK6 1076 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 ANKRD66B4E2M5 251 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 CHUKO15111 745 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 MTX2O75431 263 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 DDAH2O95865 285 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 EBLN1P0CF75 366 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 PTGIRP43119 386 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 RPS15P62841 145 aaKnown RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 SLC25A11Q02978 314 aaKnown RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 LAMB3Q13751 1172 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 GALNT3Q14435 633 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 CHRNA6Q15825 494 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 ASIC2Q16515 512 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 PAPD7Q5XG87 772 aaKnown RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 NCBP2-AS2Q69YL0 99 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 TIGD7Q6NT04 549 aaPredicted RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 JMJD6Q6NYC1 403 aaPredicted RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 CERS6Q6ZMG9 384 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 SYVN1Q86TM6 617 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 Q8NA96 180 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 GPR26Q8NDV2 337 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 BTBD6Q96KE9 485 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 GPR87Q9BY21 358 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 MRPL47Q9HD33 250 aaKnown RBP19.49■□□□□ 0.71
CCDC40-206ENST00000572083 EPHA6Q9UF33 1036 aa19.49■□□□□ 0.71
CCDC40-206ENST00000572083 ABCA12Q86UK0 2595 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 GPR89AB7ZAQ6 455 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCDC40-206ENST00000572083 KMOO15229 486 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 GPR89BP0CG08 455 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 GZMAP12544 262 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 CD86P42081 329 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 CCDC122Q5T0U0 273 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 E4F1Q66K89 784 aaPredicted RBP19.48■□□□□ 0.71
CCDC40-206ENST00000572083 ZNF547Q8IVP9 402 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 GLYATL1Q969I3 302 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 SLC41A2Q96JW4 573 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 TIMM29Q9BSF4 260 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 ZSCAN5AQ9BUG6 496 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 SLC29A3Q9BZD2 475 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 SLAMF7Q9NQ25 335 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 MYO6Q9UM54 1294 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 ZNF451Q9Y4E5 1061 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 MED13Q9UHV7 2174 aa19.48■□□□□ 0.71
CCDC40-206ENST00000572083 MMP2P08253 660 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 PIRTP0C851 137 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 CDK11BP21127 795 aaKnown RBP19.47■□□□□ 0.71
CCDC40-206ENST00000572083 MYL5Q02045 173 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 KHDC1Q4VXA5 237 aaKnown RBP19.47■□□□□ 0.71
CCDC40-206ENST00000572083 ABRAXAS1Q6UWZ7 409 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 RBM12BQ8IXT5 1001 aaKnown RBP19.47■□□□□ 0.71
CCDC40-206ENST00000572083 TRIM11Q96F44 468 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms