RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 OR6C1Q96RD1 312 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRIB3Q96RU7 358 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 MAK16Q9BXY0 300 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SIDT1Q9NXL6 827 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 UVRAGQ9P2Y5 699 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SAE1Q9UBE0 346 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 CROTQ9UKG9 612 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 NENFQ9UMX5 172 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 TMEM184BQ9Y519 407 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPO11Q9Y5K1 396 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 RPS6KL1Q9Y6S9 549 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPTBP11277 2137 aa8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPTBN1Q01082 2364 aaKnown RBP8.48□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 FLNCQ14315 2725 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 LILRA5A6NI73 299 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 C3orf70A6NLC5 250 aaPredicted RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 GOLGA6L19H0YKK7 550 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 K7EM74 188 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPR39O43194 453 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 BUD23O43709 281 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 KIAA0754O94854 1291 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 CDK14O94921 469 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 DLGAP3O95886 979 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 C9P02748 559 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 KRT1P04264 644 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 FURINP09958 794 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 BRAFP15056 766 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 XRCC1P18887 633 aaPredicted RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 STAT5AP42229 794 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 PPP1CAP62136 330 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 CDK18Q07002 472 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ABHD18Q0P651 414 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 GPR18Q14330 331 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ATP13A5Q4VNC0 1218 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 CACHD1Q5VU97 1274 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 IRGCQ6NXR0 463 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 C6orf15Q6UXA7 325 aaPredicted RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 TMC3Q7Z5M5 1100 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 LRRTM4Q86VH4 590 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRAPPC5Q8IUR0 188 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 RASGRP3Q8IV61 690 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZNF547Q8IVP9 402 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 TTC30BQ8N4P2 665 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 TRAM1L1Q8N609 369 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ESX1Q8N693 406 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 GDAP1Q8TB36 358 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 SLC35G2Q8TBE7 412 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 NAT14Q8WUY8 206 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 APOBEC4Q8WW27 367 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 IMP4Q96G21 291 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZPBPQ9BS86 351 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 ZSCAN5AQ9BUG6 496 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 XPO4Q9C0E2 1151 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 DEF6Q9H4E7 631 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 MAGEE1Q9HCI5 957 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 SPTLC3Q9NUV7 552 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 LNPEPQ9UIQ6 1025 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 TMPRSS11EQ9UL52 423 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 PSMD13Q9UNM6 376 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 PLAAQ9Y263 795 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 WDR37Q9Y2I8 494 aa8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 MN1Q10571 1320 aaPredicted RBP8.47□□□□□ -1.05
CTDNEP1-203ENST00000570385 CDC14CA4D256 554 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 PRR19A6NJB7 356 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHUKO15111 745 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 KMOO15229 486 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 AKR1B10O60218 316 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A9O60656 530 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 NDUFA10O95299 355 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 TIAF1O95411 115 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 NDST3O95803 873 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 ANKRD34CP0C6C1 535 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A6P19224 532 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 IDSP22304 550 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A1P22309 533 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A4P22310 534 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CA5AP35218 305 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CASRP41180 1078 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHRNA4P43681 627 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CLCNKAP51800 687 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 DCDC1P59894 354 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 SRSF1Q07955 248 aaKnown RBP eCLIP8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 KCNAB1Q14722 419 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 PDK1Q15118 436 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC18A3Q16572 532 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 KAZNQ674X7 775 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC9A4Q6AI14 798 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCDC70Q6NSX1 233 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 RAVER1Q8IY67 606 aaKnown RBP8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC25A41Q8N5S1 370 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CXorf40BQ96DE9 158 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 STAMBPL1Q96FJ0 436 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 OLFM3Q96PB7 478 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 RUFY1Q96T51 708 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHP1Q99653 195 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC25A51Q9H1U9 297 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms