RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KCNMB4Q86W47 210 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 GALNT13Q8IUC8 556 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 UNC5BQ8IZJ1 945 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 RASGEF1AQ8N9B8 481 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 EIF1ADQ8N9N8 165 aaKnown RBP16.54■□□□□ 0.24
COMMD4-224ENST00000568877 GSDMBQ8TAX9 411 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 CERS2Q96G23 380 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 C9orf72Q96LT7 481 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 BOCQ9BWV1 1114 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 TMEM9BQ9NQ34 198 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 TM7SF3Q9NS93 570 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 DNAAF2Q9NVR5 837 aaKnown RBP16.54■□□□□ 0.24
COMMD4-224ENST00000568877 ZNHIT2Q9UHR6 403 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 ERVK-10P10266 1014 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 CTSEP14091 401 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 ATP1B2P14415 290 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 OGNP20774 298 aaKnown RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 PMLP29590 882 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 HSP90AA5PQ58FG0 334 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 PRRT3Q5FWE3 981 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 PACS1Q6VY07 963 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 DET1Q7L5Y6 550 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 RELL1Q8IUW5 271 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 LMNTD2Q8IXW0 634 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 CALML6Q8TD86 181 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 SAP25Q8TEE9 199 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 CCDC97Q96F63 343 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 OR2M4Q96R27 311 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 TCF12Q99081 682 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 FAM167BQ9BTA0 163 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 LRRC61Q9BV99 259 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 TMEM168Q9H0V1 697 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 TRNAU1APQ9NX07 287 aaKnown RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 SPASTQ9UBP0 616 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 GPR34Q9UPC5 381 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 PRKAB1Q9Y478 270 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-224ENST00000568877 OTOGLQ3ZCN5 2332 aa16.53■□□□□ 0.24
COMMD4-224ENST00000568877 PFDN6O15212 129 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 KMOO15229 486 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 GDF9O60383 454 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 SDC3O75056 442 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 NDUFS3O75489 264 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 GSTA2P09210 222 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 DGKAP23743 735 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 TNFRSF8P28908 595 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 SSTR1P30872 391 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 NSG1P42857 185 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 CTSCP53634 463 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 C1orf61Q13536 156 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ERCC6LQ2NKX8 1250 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 TYSND1Q2T9J0 566 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF470Q6ECI4 717 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 TRMT10BQ6PF06 316 aaKnown RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 TMEM220Q6QAJ8 160 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 CRTC3Q6UUV7 619 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 CAPN12Q6ZSI9 719 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 C3orf62Q6ZUJ4 267 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 LRRTM4Q86VH4 590 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 CILP2Q8IUL8 1156 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 TRAPPC5Q8IUR0 188 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF547Q8IVP9 402 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 GABPB2Q8TAK5 448 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 LMX1AQ8TE12 382 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 SCG3Q8WXD2 468 aaKnown RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 SGF29Q96ES7 293 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF514Q96K75 400 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 LRRC4CQ9HCJ2 640 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 PPANQ9NQ55 473 aaKnown RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 IARS2Q9NSE4 1012 aaKnown RBP16.52■□□□□ 0.24
COMMD4-224ENST00000568877 MOCS1Q9NZB8 636 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 PCDHGB2Q9Y5G2 931 aa16.52■□□□□ 0.24
COMMD4-224ENST00000568877 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.23
COMMD4-224ENST00000568877 PI4KAP42356 2102 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 OR2AG2A6NM03 316 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 C4orf47A7E2U8 309 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 AQP9O43315 295 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 SGTAO43765 313 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 PCDHGA12O60330 932 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 OR1I1O60431 355 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 AP2A2O94973 939 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 ZNF7P17097 686 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-224ENST00000568877 GPX6P59796 221 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 MGAT5Q09328 741 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 ELOCQ15369 112 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 TCEA2Q15560 299 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 BCL7AQ4VC05 210 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CCNI2Q6ZMN8 369 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CHST15Q7LFX5 561 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-224ENST00000568877 KANSL1Q7Z3B3 1105 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 GATAD2AQ86YP4 633 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 DENND6AQ8IWF6 608 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms