RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SLC40A1Q9NP59 571 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 CUEDC1Q9NWM3 386 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 SEMA5BQ9P283 1151 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF624Q9P2J8 865 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 ANAPC7Q9UJX3 599 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 PCDHGA9Q9Y5G4 932 aaKnown RBP15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC30A1Q9Y6M5 507 aa15.5■□□□□ 0.07
HERPUD1-215ENST00000568676 TTLL8A6PVC2 850 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 K7EM74 188 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 HLA-DQB2P05538 268 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 FURINP09958 794 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF7P17097 686 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 NR1D1P20393 614 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 IDSP22304 550 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 ARSEP51690 589 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 SH3BP2P78314 561 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 NIPAL4Q0D2K0 466 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 MMRN1Q13201 1228 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 DPYSL3Q14195 570 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 UGT8Q16880 541 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 CAPRIN2Q6IMN6 1127 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 ADGRG6Q86SQ4 1221 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 MAGEE1Q9HCI5 957 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 SCHIP1Q9P0W5 487 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 PLEKHB1Q9UF11 243 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 PCDHGB7Q9Y5F8 929 aa15.49■□□□□ 0.07
HERPUD1-215ENST00000568676 VARSP26640 1264 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 HALP42357 657 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 LEPRP48357 1165 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 ACY1Q03154 408 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 E4F1Q66K89 784 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 SYVN1Q86TM6 617 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 KMT5CQ86Y97 462 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 HPS6Q86YV9 775 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 KCTD6Q8NC69 237 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 CPT1CQ8TCG5 803 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 CXorf40BQ96DE9 158 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC41A2Q96JW4 573 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF830Q96NB3 372 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 NUP85Q9BW27 656 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 ACTL8Q9H568 366 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 LCMT1Q9UIC8 334 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 RARRES3Q9UL19 164 aa15.48■□□□□ 0.07
HERPUD1-215ENST00000568676 CDK14O94921 469 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CYP1A2P05177 515 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 MMP2P08253 660 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CD48P09326 243 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CD86P42081 329 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 PGDP52209 483 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 RPS15P62841 145 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 PDE1BQ01064 536 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 TUBB3Q13509 450 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 GPR18Q14330 331 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC14A2Q15849 920 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 PAPD7Q5XG87 772 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 IRGCQ6NXR0 463 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CRTC3Q6UUV7 619 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SIDT2Q8NBJ9 832 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 GPR26Q8NDV2 337 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 BRSK1Q8TDC3 778 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SSC4DQ8WTU2 575 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CT55Q8WUE5 264 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 RSC1A1Q92681 617 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 FAF2Q96CS3 445 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 VPS35Q96QK1 796 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 CD180Q99467 661 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 THAP2Q9H0W7 228 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 ZNF106Q9H2Y7 1883 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 MLXIPLQ9NP71 852 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC23A2Q9UGH3 650 aa15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 USP9XQ93008 2570 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-215ENST00000568676 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 BRAFP15056 766 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 PTPN4P29074 926 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 IFI35P80217 286 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 GTF2H3Q13889 308 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 SEPT7Q16181 437 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 TMEM135Q86UB9 458 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 OR8K5Q8NH50 307 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 EID2BQ96D98 161 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 ELMO2Q96JJ3 720 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 BPIFA3Q9BQP9 254 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 SLC25A23Q9BV35 468 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 G3BP2Q9UN86 482 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 DNAJC16Q9Y2G8 782 aa15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 SPENQ96T58 3664 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-215ENST00000568676 TEX15Q9BXT5 2789 aa15.46■□□□□ 0.06
HERPUD1-215ENST00000568676 KIF1CO43896 1103 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 DDAH2O95865 285 aa15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 JCHAINP01591 159 aa15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 SKILP12757 684 aa15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 GNLYP22749 145 aa15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 FECHP22830 423 aa15.45■□□□□ 0.06
HERPUD1-215ENST00000568676 RPL10P27635 214 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms