RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 FAM151BQ6UXP7 276 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 DENND1CQ8IV53 801 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 TMCO5AQ8N6Q1 288 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 STAG3L4Q8TBR4 150 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 PNPT1Q8TCS8 783 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 TMBIM1Q969X1 311 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 CDKN2AIPNLQ96HQ2 116 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 MS4A4AQ96JQ5 239 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 COG8Q96MW5 612 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 TSGA13Q96PP4 275 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 NPLQ9BXD5 320 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ANKRD60Q9BZ19 345 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 OSBPL6Q9BZF3 934 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 SMOC2Q9H3U7 446 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 NANOGQ9H9S0 305 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 FARSBQ9NSD9 589 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 KLQ9UEF7 1012 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 VPS28Q9UK41 221 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ST14Q9Y5Y6 855 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 STX7O15400 261 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 RPP40O75818 363 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ALPIP09923 528 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 OCM2P0CE71 109 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 OCMP0CE72 109 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ZNF865P0CJ78 1059 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 DUSP4Q13115 394 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 MAP2K5Q13163 448 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 SIM2Q14190 667 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 BRMS1LQ5PSV4 323 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 ATXN7L2Q5T6C5 722 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 GPSM1Q86YR5 675 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 MFSD1Q9H3U5 465 aa8.88□□□□□ -0.99
HDGFL3-206ENST00000568294 DLGAP1O14490 977 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 XPNPEP2O43895 674 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SNAP91O60641 907 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ZNF682O95780 498 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ATXN1LP0C7T5 689 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 NUP107P57740 925 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 COL9A2Q14055 689 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SPIDRQ14159 915 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 PRR23BQ6ZRT6 265 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 KIAA0408Q6ZU52 694 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 GPRIN3Q6ZVF9 776 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 GPR180Q86V85 440 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 KRTCAP2Q8N6L1 136 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ELMO1Q92556 727 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SEPT8Q92599 483 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TMEM125Q96AQ2 219 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 PGAP3Q96FM1 320 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ATP13A1Q9HD20 1204 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TIMMDC1Q9NPL8 285 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 POLE4Q9NR33 117 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ASPDHA6ND91 283 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC22A2O15244 555 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC7A4O43246 635 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 NBNO60934 754 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 IDO1P14902 403 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 FSHRP23945 695 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 CAPGP40121 348 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 KPNA1P52294 538 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 IL5RAQ01344 420 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 OCA2Q04671 838 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TNK2Q07912 1038 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TRAP1Q12931 704 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 DDX39BQ13838 428 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 AP5B1Q2VPB7 878 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 DCP1BQ8IZD4 617 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TRPV3Q8NET8 790 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ARRDC2Q8TBH0 407 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM124BQ9H5Z6 455 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 NSUN3Q9H649 340 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 AGPAT4Q9NRZ5 378 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 PCDHB9Q9Y5E1 797 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC30A1Q9Y6M5 507 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 NUP214P35658 2090 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SYCE1LA8MT33 242 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 MYCLP1P12525 358 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 RAD23AP54725 363 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 CHRNB3Q05901 458 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TAF12Q16514 161 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 CPSF6Q16630 551 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM174BQ3ZCQ3 159 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 XKR4Q5GH76 650 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 PTRHD1Q6GMV3 140 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 LETMD1Q6P1Q0 360 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 LYSMD3Q7Z3D4 306 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 R3HCC1LQ7Z5L2 792 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 BTLAQ7Z6A9 289 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ATP6V0D2Q8N8Y2 350 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ANKFN1Q8N957 763 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 TNIP2Q8NFZ5 429 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 AARSD1Q9BTE6 412 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 ARHGAP39Q9C0H5 1083 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 EPB41L1Q9H4G0 881 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 RIBC2Q9H4K1 309 aa8.87□□□□□ -0.99
HDGFL3-206ENST00000568294 SCUBE2Q9NQ36 999 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms