RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 RETSATQ6NUM9 610 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 PCYOX1LQ8NBM8 494 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 LKAAEAR1Q8TD35 194 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 VPS33AQ96AX1 596 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 DNMT3BQ9UBC3 853 aaKnown RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 CD300AQ9UGN4 299 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 TBX21Q9UL17 535 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 SH3BP1Q9Y3L3 701 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 PRSS21Q9Y6M0 314 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 A0A1W2PRU2 124 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 EME2A4GXA9 379 aaPredicted RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 TGM5O43548 720 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 TRIM16O95361 564 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 GUCA1CO95843 209 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 SOX11P35716 441 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 STK19P49842 368 aaPredicted RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 APLP1P51693 650 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 AP1S1P61966 158 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 SAMD4BQ5PRF9 694 aaKnown RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 DDX53Q86TM3 631 aaKnown RBP18.51■□□□□ 0.55
MSLN-207ENST00000566549 ITIH5Q86UX2 942 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 OR2T11Q8NH01 316 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 C17orf80Q9BSJ5 609 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 CLPBQ9H078 707 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 ABCG8Q9H221 673 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 ANKRD36A6QL64 1941 aa18.51■□□□□ 0.55
MSLN-207ENST00000566549 GFRA2O00451 464 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 GAPDHSO14556 408 aaPredicted RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 KLK8O60259 260 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 BAIAP3O94812 1187 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 MLYCDO95822 493 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 ACRP10323 421 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 CSF2RAP15509 400 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 ITGB8P26012 769 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 HNF1BP35680 557 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 CASP2P42575 452 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 CTSOP43234 321 aaPredicted RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 PSMD8P48556 350 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 PDK3Q15120 406 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 TLR1Q15399 786 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 PABPC1LQ4VXU2 614 aaKnown RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 FOXB2Q5VYV0 432 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 TXNDC11Q6PKC3 985 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 GPRIN3Q6ZVF9 776 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 LRTOMTQ8WZ04 291 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 MRPS31Q92665 395 aaKnown RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.5■□□□□ 0.55
MSLN-207ENST00000566549 NOL11Q9H8H0 719 aaKnown RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 SDR39U1Q9NRG7 319 aaPredicted RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 AP4S1Q9Y587 144 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 KATNA1O75449 491 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 LATS1O95835 1130 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 OLFM2O95897 454 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 CHEK2O96017 543 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 UROSP10746 265 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 LAG3P18627 525 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 C8orf82Q6P1X6 216 aaPredicted RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 TSPAN33Q86UF1 283 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 ZSWIM9Q86XI8 627 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 STK40Q8N2I9 435 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 FAM110BQ8TC76 370 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 YME1L1Q96TA2 773 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 RC3H2Q9HBD1 1191 aaKnown RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 IL26Q9NPH9 171 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 MRPL40Q9NQ50 206 aaKnown RBP18.5■□□□□ 0.55
MSLN-207ENST00000566549 EGFL7Q9UHF1 273 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 NDUFAF1Q9Y375 327 aa18.5■□□□□ 0.55
MSLN-207ENST00000566549 ANAPC1Q9H1A4 1944 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 ZNF839A8K0R7 811 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 NME4O00746 187 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 CYBBP04839 570 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 CNPP09543 421 aaKnown RBP18.49■□□□□ 0.55
MSLN-207ENST00000566549 IDO1P14902 403 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 ERVPABLB-1P60509 514 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 TMEM102Q8N9M5 508 aaPredicted RBP18.49■□□□□ 0.55
MSLN-207ENST00000566549 APOL5Q9BWW9 433 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 PCDHGB4Q9UN71 923 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 DHRS7Q9Y394 339 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 PCDHGB5Q9Y5G0 923 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 SNX13Q9Y5W8 968 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 ANKRD12Q6UB98 2062 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 TRBC1P01850 177 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 ZNF7P17097 686 aaPredicted RBP18.49■□□□□ 0.55
MSLN-207ENST00000566549 NFATC2Q13469 925 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 DGKKQ5KSL6 1271 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 LETMD1Q6P1Q0 360 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 CMTM8Q8IZV2 173 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 FIBCD1Q8N539 461 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 ROPN1LQ96C74 230 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 C1QTNF3Q9BXJ4 246 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 INTS6Q9UL03 887 aaKnown RBP18.49■□□□□ 0.55
MSLN-207ENST00000566549 GPR45Q9Y5Y3 372 aa18.49■□□□□ 0.55
MSLN-207ENST00000566549 BBIP1A8MTZ0 92 aa18.48■□□□□ 0.55
MSLN-207ENST00000566549 SLC25A14O95258 325 aaPredicted RBP18.48■□□□□ 0.55
MSLN-207ENST00000566549 BPIP17213 487 aa18.48■□□□□ 0.55
MSLN-207ENST00000566549 GRIA3P42263 894 aa18.48■□□□□ 0.55
MSLN-207ENST00000566549 HTR6P50406 440 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms