RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 H0Y8X5 98 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 DYNC1I1O14576 645 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 RASGRF2O14827 1237 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 VILLO15195 856 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GRID2O43424 1007 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 NUAK1O60285 661 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 OR1I1O60431 355 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 CDH16O75309 829 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 TCEA3O75764 348 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 PIAS1O75925 651 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 KRT37O76014 449 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 C1QAP02745 245 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 FTH1P02794 183 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GSTM1P09488 218 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ZNF8P17098 575 aaPredicted RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 VCLP18206 1134 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 CHRM3P20309 590 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 POLD2P49005 469 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GSTM4Q03013 218 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 EFTUD2Q15029 972 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDH1-208ENST00000565810 DUOXA1Q1HG43 343 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ZNF648Q5T619 568 aaPredicted RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 UBAP2Q5T6F2 1119 aaKnown RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 FAM45BPQ6NSW5 357 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 UGT3A1Q6NUS8 523 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 CNSTQ6PJW8 725 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 LRIG3Q6UXM1 1119 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 MACC1Q6ZN28 852 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 DET1Q7L5Y6 550 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ADGRG6Q86SQ4 1221 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 LRRTM4Q86VH4 590 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 PARGQ86W56 976 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GALNT13Q8IUC8 556 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 RIBC1Q8N443 379 aaPredicted RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 RASGEF1AQ8N9B8 481 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 OR13H1Q8NG92 308 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 C1orf216Q8TAB5 229 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 FAM45AQ8TCE6 357 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 LPGAT1Q92604 370 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ATOH1Q92858 354 aaPredicted RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 MTBPQ96DY7 904 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 SGF29Q96ES7 293 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ATXN7L3BQ96GX2 97 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 VPS39Q96JC1 886 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 RBBP8Q99708 897 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 AARSD1Q9BTE6 412 aaKnown RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 BOCQ9BWV1 1114 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 LGR4Q9BXB1 951 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 KCNH6Q9H252 994 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ACBD3Q9H3P7 528 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 CARS2Q9HA77 564 aaKnown RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ATXN10Q9UBB4 475 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 ZNHIT2Q9UHR6 403 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 PILRBQ9UKJ0 227 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GPR34Q9UPC5 381 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 SLC17A4Q9Y2C5 497 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 VWA7Q9Y334 891 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 GPSM3Q9Y4H4 160 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 PCDHGA5Q9Y5G8 931 aa7.69□□□□□ -1.18
CDH1-208ENST00000565810 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 OAS3Q9Y6K5 1087 aaKnown RBP7.69□□□□□ -1.18
CDH1-208ENST00000565810 SPTY2D1-AS1A0A0U1RR47 76 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 FAM95CA0A1B0GW59 222 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 KLHL33A6NCF5 533 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 OR2AG2A6NM03 316 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 H3BM21 787 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 KPNA5O15131 536 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 KMOO15229 486 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 KCNJ13O60928 360 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 VPS26AO75436 327 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 POP7O75817 140 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 RASGRP1O95267 797 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 TRIM16O95361 564 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SHBGP04278 402 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 CEACAM5P06731 702 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SYPP08247 313 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 ITGA2BP08514 1039 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SNRPAP09012 282 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 CTSEP14091 401 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SAT1P21673 171 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 GABRB3P28472 473 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 CA5AP35218 305 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SKIV2L2P42285 1042 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 SLCO1A2P46721 670 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 GNPDA1P46926 289 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 CSNK1EP49674 416 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 PRLHRP49683 370 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 LIMK2P53671 638 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 SRP54P61011 504 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 B4GALNT1Q00973 533 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 POU4F1Q01851 419 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 PLOD1Q02809 727 aaPredicted RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 PPARDQ03181 441 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 DNAJC3Q13217 504 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 PDAP1Q13442 181 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 USP10Q14694 798 aaKnown RBP7.68□□□□□ -1.18
CDH1-208ENST00000565810 RASA2Q15283 850 aa7.68□□□□□ -1.18
CDH1-208ENST00000565810 LPAL2Q16609 132 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms