RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LEPRP48357 1165 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 IL5RAQ01344 420 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FOXD4Q12950 439 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SEMA3AQ14563 771 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FSCN1Q16658 493 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RNF19BQ6ZMZ0 732 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ADCK1Q86TW2 530 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OSCP1Q8WVF1 389 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SENP8Q96LD8 212 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 THUMPD3Q9BV44 507 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HMG20AQ9NP66 347 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FAM118AQ9NWS6 357 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RNF112Q9ULX5 631 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 UPK1AO00322 258 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CNMDO75829 334 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CD4P01730 458 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PSMB9P28065 219 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ALDH3A2P51648 485 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CHRNB3Q05901 458 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GALNT3Q14435 633 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NKG7Q16617 165 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SV2CQ496J9 727 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PAGE2Q7Z2X7 111 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 LINC01465Q8N7H1 131 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CHDHQ8NE62 594 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DPF3Q92784 378 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C17orf80Q9BSJ5 609 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HPS4Q9NQG7 708 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 AP3B1O00203 1094 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MATN3O15232 486 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 BMP4P12644 408 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GP2P55259 537 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZNF846Q147U1 533 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CATSPEREQ5SY80 951 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TWF2Q6IBS0 349 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PAQR3Q6TCH7 311 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MILR1Q7Z6M3 343 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FKBP10Q96AY3 582 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC9A7Q96T83 725 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 EHD1Q9H4M9 534 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DNMT3BQ9UBC3 853 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CASTOR2A6NHX0 329 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DEAF1O75398 565 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ADPRMQ3LIE5 342 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FBXO39Q8N4B4 442 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PDPRQ8NCN5 879 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
MAP1LC3B-206ENST00000564844 IQCA1LA6NCM1 817 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GSTA4O15217 222 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TBC1D4O60343 1298 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SNX2O60749 519 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GOT2P00505 430 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CCNCP24863 283 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C18orf21Q32NC0 220 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OR10A6Q8NH74 314 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 LPPQ93052 612 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SMOC2Q9H3U7 446 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 UXTQ9UBK9 157 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NDUFS2O75306 463 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OR4F21O95013 312 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SCAPQ12770 1279 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ATP6AP1LQ52LC2 224 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SULT1C3Q6IMI6 304 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NCLNQ969V3 563 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NODALQ96S42 347 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MROQ9BYG7 248 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC52A3Q9NQ40 469 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ERVK-18Q9QC07 812 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLCO3A1Q9UIG8 710 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ATP11BQ9Y2G3 1177 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MIA3Q5JRA6 1907 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ASB14A6NK59 587 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HAPLN1P10915 354 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SMN1Q16637 294 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TMEM179BQ7Z7N9 219 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZNF555Q8NEP9 628 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 STARD8Q92502 1023 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TRMOQ9BU70 441 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TRIM54Q9BYV2 358 aa20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GPN2Q9H9Y4 310 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NPEPPSL1A6NEC2 478 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PSMD3O43242 534 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NDUFB5O43674 189 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CTF1Q16619 201 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SDHAF4Q5VUM1 108 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ALKAL1Q6UXT8 129 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SYVN1Q86TM6 617 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CIR1Q86X95 450 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 L3HYPDHQ96EM0 354 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TUBA1CQ9BQE3 449 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GDAP2Q9NXN4 497 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 KIAA1522Q9P206 1035 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FBXO10Q9UK96 956 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ACTL7AQ9Y615 435 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SBF1O95248 1867 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DFNA5O60443 496 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DDNO94850 711 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TSPY1Q01534 308 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 AASDHQ4L235 1098 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms