RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SPANXN3Q5MJ09 141 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 UBAP2Q5T6F2 1119 aaKnown RBP12.32□□□□□ -0.44
KARS-204ENST00000564578 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 HID1Q8IV36 788 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 CLDN19Q8N6F1 224 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 GPR150Q8NGU9 434 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 ULK4Q96C45 1275 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 SGF29Q96ES7 293 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 COPS8Q99627 209 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 TM7SF3Q9NS93 570 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 C20orf96Q9NUD7 363 aaPredicted RBP12.32□□□□□ -0.44
KARS-204ENST00000564578 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 TP53BP1Q12888 1972 aaPredicted RBP12.32□□□□□ -0.44
KARS-204ENST00000564578 LRP4O75096 1905 aa12.32□□□□□ -0.44
KARS-204ENST00000564578 C1QAP02745 245 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 F7P08709 466 aaPredicted RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 DGKAP23743 735 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 IL9RQ01113 521 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 NAA30Q147X3 362 aaPredicted RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 FASTKD1Q53R41 847 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 CERS6Q6ZMG9 384 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 KANSL1Q7Z3B3 1105 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 C11orf96Q7Z7L8 435 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CILP2Q8IUL8 1156 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 DENND6AQ8IWF6 608 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 EIF1ADQ8N9N8 165 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 SAP25Q8TEE9 199 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CERS2Q96G23 380 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CLPBQ9H078 707 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 TMEM168Q9H0V1 697 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CARS2Q9HA77 564 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 DNAAF2Q9NVR5 837 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 UCKL1Q9NWZ5 548 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 MTRF1LQ9UGC7 380 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 OR2AG2A6NM03 316 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 DFNA5O60443 496 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 SDC3O75056 442 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 PIAS2O75928 621 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 RASGRP1O95267 797 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CER1O95813 267 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 GIMD1P0DJR0 217 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 TNFRSF8P28908 595 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 HNRNPKP61978 463 aaKnown RBP eCLIP12.31□□□□□ -0.44
KARS-204ENST00000564578 CTBP1Q13363 440 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 FRG1Q14331 258 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 ZNF789Q5FWF6 425 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 ZNF470Q6ECI4 717 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CCNI2Q6ZMN8 369 aaPredicted RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 DET1Q7L5Y6 550 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 KCNMB4Q86W47 210 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 OXR1Q8N573 874 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 CCL4L1Q8NHW4 92 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 UBXN4Q92575 508 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 EDEM2Q9BV94 578 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
KARS-204ENST00000564578 PLEKHM1Q9Y4G2 1056 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 PRSS21Q9Y6M0 314 aa12.31□□□□□ -0.44
KARS-204ENST00000564578 TCRBV9S1A1TA0A576 114 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 GRID2O43424 1007 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 PIAS1O75925 651 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 S1PR4O95977 384 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 ATP1B2P14415 290 aaPredicted RBP12.3□□□□□ -0.44
KARS-204ENST00000564578 EPHA8P29322 1005 aaPredicted RBP12.3□□□□□ -0.44
KARS-204ENST00000564578 AKT1P31749 480 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 GNPDA1P46926 289 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 BLKP51451 505 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
KARS-204ENST00000564578 VSNL1P62760 191 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 C1orf61Q13536 156 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 ITIH4Q14624 930 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 TCEA2Q15560 299 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 KYNUQ16719 465 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 TEDDM1Q5T9Z0 273 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 MRNIPQ6NTE8 343 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 PACS1Q6VY07 963 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 DBX2Q6ZNG2 339 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 CAPN12Q6ZSI9 719 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 NRROSQ86YC3 692 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 GATAD2AQ86YP4 633 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 ZNF548Q8NEK5 533 aaPredicted RBP12.3□□□□□ -0.44
KARS-204ENST00000564578 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms