RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 FAM111AQ96PZ2 611 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 MCCC1Q96RQ3 725 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-203ENST00000564106 CCT8L2Q96SF2 557 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 SCNM1Q9BWG6 230 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
UBFD1-203ENST00000564106 RAD18Q9NS91 495 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 EIF2B4Q9UI10 523 aaKnown RBP9.68□□□□□ -0.86
UBFD1-203ENST00000564106 SLCO3A1Q9UIG8 710 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
UBFD1-203ENST00000564106 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
UBFD1-203ENST00000564106 ACOT9Q9Y305 439 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 SPO11Q9Y5K1 396 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
UBFD1-203ENST00000564106 C1orf232A0A0U1RR37 186 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 EDDM13A0A1B0GTR0 161 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 A0A1B0GVT2 93 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 TSPAN11A1L157 253 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC162PA2VCL2 907 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 METTL12A8MUP2 240 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 TTC34A8MYJ7 566 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 TCP11X1B4DZS4 312 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 EBAG9O00559 213 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 BNIP3LO60238 219 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 H2AFYO75367 372 aaKnown RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 NDUFS3O75489 264 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 PRNPP04156 253 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 PRKCGP05129 697 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 IGHV4-34P06331 123 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 C2P06681 752 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CEACAM1P13688 526 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ITGALP20701 1170 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 SLC8A1P32418 973 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 SERPINB4P48594 390 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 SUOXP51687 545 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ARSDP51689 593 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 SEC24CP53992 1094 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 TMPRSS15P98073 1019 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 MPP1Q00013 466 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CACNG1Q06432 222 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ASPHQ12797 758 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 STARD3Q14849 445 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ZKSCAN8Q15776 578 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 FAM83EQ2M2I3 478 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 RAVER1Q8IY67 606 aaKnown RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 GPATCH11Q8N954 259 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC63Q8NA47 563 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 OR6K2Q8NGY2 324 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 ZNF473Q8WTR7 871 aaKnown RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 FRS2Q8WU20 508 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 PPP1R16AQ96I34 528 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CDH19Q9H159 772 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 MIR1-1HGQ9H1L0 117 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 MLXIPLQ9NP71 852 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 FBXO6Q9NRD1 293 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 DNAAF2Q9NVR5 837 aaKnown RBP9.67□□□□□ -0.86
UBFD1-203ENST00000564106 IL17CQ9P0M4 197 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 SLC17A7Q9P2U7 560 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 DKK3Q9UBP4 350 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 IL36AQ9UHA7 158 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 BTBD3Q9Y2F9 522 aa9.67□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC189A1A4V9 331 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 MEI4A8MW99 385 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SYNCRIPO60506 623 aaKnown RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PLIN3O60664 434 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CBFA2T3O75081 653 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 NDUFS2O75306 463 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 HAUS5O94927 633 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 S1PR4O95977 384 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 IL1BP01584 269 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SLC4A1P02730 911 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 WNT1P04628 370 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 UGT2B4P06133 528 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PYGLP06737 847 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ALPIP09923 528 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 TAC1P20366 129 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 DRD4P21917 467 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CD9P21926 228 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 XPAP23025 273 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ALDH3A1P30838 453 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 MC4RP32245 332 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 FOXN2P32314 431 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 HOXD12P35452 270 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 HNF1BP35680 557 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SPAM1P38567 509 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CSNK1EP49674 416 aaKnown RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CSRP3P50461 194 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PRKAA2P54646 552 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SIM1P81133 766 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ITGA9Q13797 1035 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ARHGEF7Q14155 803 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ELAVL3Q14576 367 aaKnown RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms