RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 PAK5Q9P286 719 aa19.58■□□□□ 0.72
CMTM3-207ENST00000564060 TMPRSS11EQ9UL52 423 aa19.58■□□□□ 0.72
CMTM3-207ENST00000564060 ADAMTS20P59510 1910 aa19.58■□□□□ 0.72
CMTM3-207ENST00000564060 A6NCN8 305 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 PPM1DO15297 605 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A9O60656 530 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 FGGP02679 453 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 RALBP11234 206 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A6P19224 532 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 MSH3P20585 1137 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 ITGALP20701 1170 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A1P22309 533 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A4P22310 534 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 AKT1P31749 480 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A3P35503 534 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A5P35504 534 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 ZNF140P52738 457 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 OR1D5P58170 312 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 MSLNQ13421 630 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 SNX1Q13596 522 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 PLA2G4EQ3MJ16 856 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 AMZ1Q400G9 498 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 KHDC1Q4VXA5 237 aaKnown RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 C4orf22Q6V702 233 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 LRRC69Q6ZNQ3 347 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 AHCYL2Q96HN2 611 aaKnown RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 ZMYND15Q9H091 742 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A7Q9HAW7 530 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A10Q9HAW8 530 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 UGT1A8Q9HAW9 530 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 AKAP7Q9P0M2 348 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 FKBPLQ9UIM3 349 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 CRLS1Q9UJA2 301 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 ATXN7L1Q9ULK2 861 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 JRKLQ9Y4A0 524 aa19.57■□□□□ 0.72
CMTM3-207ENST00000564060 DNMT3AQ9Y6K1 912 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 ANKRD11Q6UB99 2663 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-207ENST00000564060 DMXL2Q8TDJ6 3036 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 A0A087WV48 116 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 KLHL33A6NCF5 533 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 GAPDHSO14556 408 aaPredicted RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 B4GAT1O43505 415 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 LDB2O43679 373 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 DUX1O43812 170 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 CEP104O60308 925 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 IDSP22304 550 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 PPM1FP49593 454 aaPredicted RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 PCBP4P57723 403 aaKnown RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 ZFP36L1Q07352 338 aaKnown RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 CDH17Q12864 832 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 NFATC2Q13469 925 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 SQSTM1Q13501 440 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 LAMB3Q13751 1172 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 PTPRCAPQ14761 206 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 RAB11FIP2Q7L804 512 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 B3GNT8Q7Z7M8 397 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 ZNF547Q8IVP9 402 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 DNAAF3Q8N9W5 541 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 OR13C4Q8NGS5 318 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 OR10G6Q8NH81 332 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 STYXQ8WUJ0 223 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 HEXDCQ8WVB3 486 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 CMKLR1Q99788 373 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 FOXP3Q9BZS1 431 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 EPB41L1Q9H4G0 881 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 DRG1Q9Y295 367 aaKnown RBP19.56■□□□□ 0.72
CMTM3-207ENST00000564060 DNAJC16Q9Y2G8 782 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 SLC30A1Q9Y6M5 507 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 PIKFYVEQ9Y2I7 2098 aa19.56■□□□□ 0.72
CMTM3-207ENST00000564060 IGHV1OR21-1A0A087WYE8 117 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 PDZK1P1A8MUH7 402 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 CFAP99D6REC4 459 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 H7C0S8 307 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 PLD2O14939 933 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 CASC3O15234 703 aaKnown RBP19.55■□□□□ 0.72
CMTM3-207ENST00000564060 EML2O95834 649 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 ITGA2BP08514 1039 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 EIF2S3P41091 472 aaKnown RBP19.55■□□□□ 0.72
CMTM3-207ENST00000564060 EPHA4P54764 986 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 DMPKQ09013 629 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 SEMA5AQ13591 1074 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 SEPT6Q14141 434 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 SIX1Q15475 284 aaPredicted RBP19.55■□□□□ 0.72
CMTM3-207ENST00000564060 GPR33Q49SQ1 333 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 FOXR1Q6PIV2 292 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 WASH2PQ6VEQ5 465 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 PPP1R21Q6ZMI0 780 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 SNX20Q7Z614 316 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 AMZ2Q86W34 360 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 TRIM48Q8IWZ4 208 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 FBXO39Q8N4B4 442 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 ZNF248Q8NDW4 579 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 DCUN1D1Q96GG9 259 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 SLC46A1Q96NT5 459 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 DCBLD2Q96PD2 775 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 ETNK1Q9HBU6 452 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 WASH6PQ9NQA3 447 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 PRDM8Q9NQV8 689 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 RAB6BQ9NRW1 208 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms