RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 BPTFQ12830 3046 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 TRBV5-4A0A0C4DH59 114 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 PPM1DO15297 605 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 B4GAT1O43505 415 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 CSO75390 466 aaKnown RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 RPLP0P05388 317 aaKnown RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 ITGALP20701 1170 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 MC4RP32245 332 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 FASLGP48023 281 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 CTSCP53634 463 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 BASP1P80723 227 aaKnown RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 LAMB3Q13751 1172 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 SPIDRQ14159 915 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 KCTD19Q17RG1 926 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 INSCQ1MX18 579 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 SKIDA1Q1XH10 827 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 ISXQ2M1V0 245 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 PLA2G4EQ3MJ16 856 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 GPR33Q49SQ1 333 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 CCDC38Q502W7 563 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 TMEM220Q6QAJ8 160 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 SPRED1Q7Z699 444 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 TRAPPC5Q8IUR0 188 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 NXPE1Q8N323 547 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 Q8N9G6 341 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 SLC37A2Q8TED4 501 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 ULK4Q96C45 1275 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 NRSN2Q9GZP1 204 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 PRDM8Q9NQV8 689 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 RIMKLBQ9ULI2 386 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 PCDHB1Q9Y5F3 818 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 DNMT3AQ9Y6K1 912 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
CMTM3-206ENST00000563672 SLC30A1Q9Y6M5 507 aa19.98■□□□□ 0.79
CMTM3-206ENST00000563672 TRBV23OR9-2A0A075B6M9 112 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 HEATR9A2RTY3 570 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 OR5K4A6NMS3 321 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 RHPN2P1A8MT19 583 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 SNX2O60749 519 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 KCNJ13O60928 360 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 PHF2O75151 1096 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 POP7O75817 140 aaKnown RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 KRT14P02533 472 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 F3P13726 295 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 MSH3P20585 1137 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 ADRA1DP25100 572 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 GPR3P46089 330 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 ARSDP51689 593 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 CDK16Q00536 496 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 RTP5Q14D33 572 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 TRIP13Q15645 432 aaPredicted RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 CCDC137Q6PK04 289 aaKnown RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 MICALCLQ6ZW33 695 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 GRAMD1AQ96CP6 724 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 ZNF514Q96K75 400 aaPredicted RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 GFM1Q96RP9 751 aaKnown RBP19.97■□□□□ 0.79
CMTM3-206ENST00000563672 FAM96AQ9H5X1 160 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 DKK4Q9UBT3 224 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 CRLS1Q9UJA2 301 aa19.97■□□□□ 0.79
CMTM3-206ENST00000563672 FREM2Q5SZK8 3169 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 KIR2DS5A0A0G2JLQ3 304 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 A0A0G2JNG1 304 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 KIR2DS3K7RE56 304 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 SGTAO43765 313 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 SLC2A4P14672 509 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 TPSB2P20231 275 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 AKT1P31749 480 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 MAGEA6P43360 314 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 FNTAP49354 379 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 CDKN1CP49918 316 aaPredicted RBP19.96■□□□□ 0.79
CMTM3-206ENST00000563672 PDX1P52945 283 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 KIR2DS5Q14953 304 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 TPSAB1Q15661 275 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 TSTD2Q5T7W7 516 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 NLRP9Q7RTR0 991 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 OR13J1Q8NGT2 312 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 HEXDCQ8WVB3 486 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 SGF29Q96ES7 293 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 NAPGQ99747 312 aaPredicted RBP19.96■□□□□ 0.79
CMTM3-206ENST00000563672 OSGEPL1Q9H4B0 414 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 CCDC86Q9H6F5 360 aaKnown RBP19.96■□□□□ 0.79
CMTM3-206ENST00000563672 SYNDIG1Q9H7V2 258 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 DNAJC16Q9Y2G8 782 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 ENTPD2Q9Y5L3 495 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 ZNF106Q9H2Y7 1883 aaKnown RBP19.96■□□□□ 0.79
CMTM3-206ENST00000563672 USP24Q9UPU5 2620 aa19.96■□□□□ 0.79
CMTM3-206ENST00000563672 COL27A1Q8IZC6 1860 aaPredicted RBP19.95■□□□□ 0.78
CMTM3-206ENST00000563672 IGLV3-16A0A075B6K0 115 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 GOLGA6L10A0A0M3HER8 536 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 TCRBV7S3A2A0A539 114 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 CCDC78A2IDD5 438 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 OR2AG2A6NM03 316 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 D6RAR5 112 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 AP3B1O00203 1094 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 VCLP18206 1134 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 OR1D5P58170 312 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 ACVR1Q04771 509 aa19.95■□□□□ 0.78
CMTM3-206ENST00000563672 CACNG1Q06432 222 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms