RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 NDUFS3O75489 264 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 CTSEP14091 401 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF7P17097 686 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 PHBP35232 272 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 NSG1P42857 185 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 KHDC1Q4VXA5 237 aaKnown RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 PACS1Q6VY07 963 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 LRRTM4Q86VH4 590 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 TRAPPC5Q8IUR0 188 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 GSPT2Q8IYD1 628 aaKnown RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 SCG3Q8WXD2 468 aaKnown RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF514Q96K75 400 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 TCF12Q99081 682 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 VPS37BQ9H9H4 285 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 IARS2Q9NSE4 1012 aaKnown RBP18.59■□□□□ 0.57
RAB40C-207ENST00000563109 SPASTQ9UBP0 616 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 ZNHIT2Q9UHR6 403 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 GPSM3Q9Y4H4 160 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 IGLV3-16A0A075B6K0 115 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 A0A1B0GTQ1 180 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 QSOX1O00391 747 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 GRID2O43424 1007 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 DNAJC6O75061 913 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 ERVK-10P10266 1014 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 ATP1B2P14415 290 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 SSTR1P30872 391 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 STX2P32856 288 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 SLC1A2P43004 574 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 RXRGP48443 463 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 MGAT5Q09328 741 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 SEMA3AQ14563 771 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 TYSND1Q2T9J0 566 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 PRAMEF14Q5SWL7 426 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 CRTC3Q6UUV7 619 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 DET1Q7L5Y6 550 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 LDB1Q86U70 411 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 CILP2Q8IUL8 1156 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 UNC5BQ8IZJ1 945 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 FSTL5Q8N475 847 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 RASGEF1AQ8N9B8 481 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 CDKL2Q92772 493 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 SCARF2Q96GP6 870 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 CLPBQ9H078 707 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 CDC42EP4Q9H3Q1 356 aaKnown RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 PLAC1Q9HBJ0 212 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 TMEM9BQ9NQ34 198 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 INTS10Q9NVR2 710 aaKnown RBP18.58■□□□□ 0.56
RAB40C-207ENST00000563109 ZFATQ9P243 1243 aa18.58■□□□□ 0.56
RAB40C-207ENST00000563109 UBA6A0AVT1 1052 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-207ENST00000563109 KMOO15229 486 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 PIAS2O75928 621 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 AP2A2O94973 939 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 TUBBP07437 444 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 EPHA8P29322 1005 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-207ENST00000563109 VSNL1P62760 191 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 IL9RQ01113 521 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 PYCR3Q53H96 274 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 WDR93Q6P2C0 686 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 ZNF449Q6P9G9 518 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 TRMT10BQ6PF06 316 aaKnown RBP18.57■□□□□ 0.56
RAB40C-207ENST00000563109 C3orf62Q6ZUJ4 267 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 OR2I1PQ8NGU4 316 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 BOCQ9BWV1 1114 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 IL21RQ9HBE5 538 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 LRRC4CQ9HCJ2 640 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 TRNAU1APQ9NX07 287 aaKnown RBP18.57■□□□□ 0.56
RAB40C-207ENST00000563109 NSMCE4AQ9NXX6 385 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 NINJ2Q9NZG7 142 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 KLF15Q9UIH9 416 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 PNMA8BQ9ULN7 279 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-207ENST00000563109 GPR34Q9UPC5 381 aa18.57■□□□□ 0.56
RAB40C-207ENST00000563109 OR2AG2A6NM03 316 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 PRMT5O14744 637 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-207ENST00000563109 CHUKO15111 745 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 SCAMP1O15126 338 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 SDC3O75056 442 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 OR56A5P0C7T3 313 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 ZNF883P0CG24 379 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 VCLP18206 1134 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 GPX6P59796 221 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 B4GALNT1Q00973 533 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 ILF3Q12906 894 aaKnown RBP eCLIP18.56■□□□□ 0.56
RAB40C-207ENST00000563109 LRP8Q14114 963 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 ELOCQ15369 112 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 INSCQ1MX18 579 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 BCL7AQ4VC05 210 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 PRRT3Q5FWE3 981 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 KCTD16Q68DU8 428 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 TMEM220Q6QAJ8 160 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 CCNI2Q6ZMN8 369 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-207ENST00000563109 KIAA0408Q6ZU52 694 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 LRRC6Q86X45 466 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 DENND6AQ8IWF6 608 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 CNTN4Q8IWV2 1026 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 ZNF548Q8NEK5 533 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-207ENST00000563109 LMX1AQ8TE12 382 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 LRRC61Q9BV99 259 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 TSSK1BQ9BXA7 367 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 GSDMCQ9BYG8 508 aa18.56■□□□□ 0.56
RAB40C-207ENST00000563109 TCEAL2Q9H3H9 227 aaPredicted RBP18.56■□□□□ 0.56
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