RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZFP36L2P47974 494 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 PSEN2P49810 448 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 PLA2G16P53816 162 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 MTPNP58546 118 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 CHRNB3Q05901 458 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 RAD51Q06609 339 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 MTA1Q13330 715 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 GALNT3Q14435 633 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 CYP2A13Q16696 494 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 PIK3R6Q5UE93 754 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 FAM171BQ6P995 826 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 IGFN1Q86VF2 1251 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 LRRTM3Q86VH5 581 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 HID1Q8IV36 788 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 MAGED4Q96JG8 741 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 CSF3RQ99062 836 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 NEURL2Q9BR09 285 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 FAM105AQ9NUU6 356 aa13.85□□□□□ -0.19
VPS9D1-202ENST00000561976 FAM234BA2RU67 622 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 CDC7O00311 574 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 RPP40O75818 363 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 UROSP10746 265 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 FUT4P22083 530 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 CRHBPP24387 322 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 IL12AP29459 219 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 MLLT10P55197 1068 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ERVK-8P63133 956 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 GRIK2Q13002 908 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 RBM48Q5RL73 367 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ARTNQ5T4W7 220 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 BEND5Q7L4P6 421 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 EFL1Q7Z2Z2 1120 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ZDHHC13Q8IUH4 622 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 RIMKLAQ8IXN7 391 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SCML4Q8N228 414 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 NAT16Q8N8M0 369 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SEMA3CQ99985 751 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 TOR3AQ9H497 397 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 GPN2Q9H9Y4 310 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 NMUR1Q9HB89 426 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 POPDC3Q9HBV1 291 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 A0A1W2PQH9 124 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 NPEPPSL1A6NEC2 478 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 BTN3A1O00481 513 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 TBC1D4O60343 1298 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SOAT2O75908 522 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ALPLP05186 524 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 PRR35P0CG20 571 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 RAP2AP10114 183 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SUOXP51687 545 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 ADAM17P78536 824 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 PIGFQ07326 219 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 PRKG2Q13237 762 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SCN4BQ8IWT1 228 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 SPARTQ8N0X7 666 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 UMODL1-AS1Q8N2C9 162 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 DTWD1Q8N5C7 304 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 OR2T11Q8NH01 316 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 TAS2R13Q9NYV9 303 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 GALPQ9UBC7 116 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 DAPK2Q9UIK4 370 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 PCDHB3Q9Y5E6 796 aa13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 TRIP12Q14669 1992 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-202ENST00000561976 TRIM43BA6NCK2 446 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 SYCE1LA8MT33 242 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 G3V2T6 193 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ADAM23O75077 832 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 TULP3O75386 442 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ANXA6P08133 673 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 GSTM2P28161 218 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 RXRGP48443 463 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 STC1P52823 247 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 OCA2Q04671 838 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 CRY1Q16526 586 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ALFQ53S48 1182 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 C1QTNF12Q5T7M4 302 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 TTC23Q5W5X9 447 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 UGT3A1Q6NUS8 523 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 GPR142Q7Z601 462 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 PGBD5Q8N414 524 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 CDYL2Q8N8U2 506 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ZNF555Q8NEP9 628 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ARRDC2Q8TBH0 407 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 SERPINB11Q96P15 392 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 NUSAP1Q9BXS6 441 aaKnown RBP13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 SMURF2Q9HAU4 748 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 LTB4R2Q9NPC1 389 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 COMMD8Q9NX08 183 aa13.83□□□□□ -0.19
VPS9D1-202ENST00000561976 WDR37Q9Y2I8 494 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms