RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	STX6	O43752	255 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CEP104	O60308	925 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	FMO6P	O60774	539 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SEC22B	O75396	215 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	BAG3	O95817	575 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	TPM3	P06753	285 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CLTB	P09497	229 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CETP	P11597	493 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	GAP43	P17677	238 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CHM	P24386	653 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	MAPK3	P27361	379 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ABCD3	P28288	659 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	HOXA11	P31270	313 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	KRT2	P35908	639 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	POLD2	P49005	469 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	TKTL1	P51854	596 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC26A5	P58743	744 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARF3	P61204	181 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	RBP5	P82980	135 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARF1	P84077	181 aa	Known RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	NHLH1	Q02575	133 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CYP4A11	Q02928	519 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPARD	Q03181	441 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	GAD2	Q05329	585 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ACVR2B	Q13705	512 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	EDRF1	Q3B7T1	1238 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	KRBOX4	Q5JUW0	171 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SPDYC	Q5MJ68	293 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC9C2	Q5TAH2	1124 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	PAPD7	Q5XG87	772 aa	Known RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ACAD10	Q6JQN1	1059 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	HMBOX1	Q6NT76	420 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	WDR73	Q6P4I2	378 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SYCE2	Q6PIF2	218 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC186	Q7Z3E2	898 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CTU1	Q7Z7A3	348 aa	Known RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC170	Q8IYT3	715 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMCO5A	Q8N6Q1	288 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC148	Q8NFR7	591 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZCCHC10	Q8TBK6	192 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	PIGO	Q8TEQ8	1089 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	DPF1	Q92782	380 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC39A3	Q9BRY0	314 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	NTPCR	Q9BSD7	190 aa	Known RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CRACR2A	Q9BSW2	395 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	GATA5	Q9BWX5	397 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	MAK16	Q9BXY0	300 aa	Known RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	BOLA2	Q9H3K6	86 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	HIPK3	Q9H422	1215 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	EPHX3	Q9H6B9	360 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431		Q9N2J8	555 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	MLXIPL	Q9NP71	852 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ENTPD7	Q9NQZ7	604 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ADPRHL2	Q9NX46	363 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CDH22	Q9UJ99	828 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	CAMK2A	Q9UQM7	478 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	OSGIN2	Q9Y236	505 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	SNX8	Q9Y5X2	465 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF532	Q9HCE3	1301 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	MYH7	P12883	1935 aa		4.17	□□□□□ -1.74
LRRC28-222	ENST00000561431	TNRC18	O15417	2968 aa	Predicted RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431		A0A0G2JMZ2	1700 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	UBXN8	O00124	270 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	DDX39A	O00148	427 aa	Known RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	PDHX	O00330	501 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	CXCL11	O14625	94 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	PRPSAP2	O60256	369 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TLR2	O60603	784 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RTN3	O95197	1032 aa	Predicted RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	LCK	P06239	509 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	CHRM4	P08173	479 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RHOXF2B	P0C7M4	288 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	IFNAR1	P17181	557 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	KEL	P23276	732 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GJC1	P36383	396 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GNL1	P36915	607 aa	Predicted RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	MTNR1A	P48039	350 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GPC3	P51654	580 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARFIP1	P53367	373 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RHAG	Q02094	409 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GABPA	Q06546	454 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZBTB17	Q13105	803 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	PGM5	Q15124	567 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC18A3	Q16572	532 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	BAK1	Q16611	211 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GJB7	Q6PEY0	223 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	SLC2A7	Q6PXP3	512 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL20RB	Q6UXL0	311 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	MON1A	Q86VX9	555 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	CHD1L	Q86WJ1	897 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	LRRC43	Q8N309	656 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZBTB44	Q8NCP5	570 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	SUN5	Q8TC36	379 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	CD99L2	Q8TCZ2	262 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	KAT2A	Q92830	837 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RHOXF2	Q9BQY4	288 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	HGH1	Q9BTY7	390 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	AGXT2	Q9BYV1	514 aa		4.16	□□□□□ -1.74

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