RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 H0Y858 1186 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 ARNTLO00327 626 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TBX10O75333 385 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 RASSF9O75901 435 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 SUPT7LO94864 414 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 SLC25A14O95258 325 aaPredicted RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 ITGB7P26010 798 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 PTPN4P29074 926 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 ALDH18A1P54886 795 aaKnown RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 B4GALNT1Q00973 533 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 GRM2Q14416 872 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 PFKFB4Q16877 469 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 SH2D4BQ5SQS7 431 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 HENMT1Q5T8I9 393 aaKnown RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 PARM1Q6UWI2 310 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TECPR1Q7Z6L1 1165 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 ADAMTSL2Q86TH1 951 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TREML1Q86YW5 311 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 FBXO39Q8N4B4 442 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TRAM1L1Q8N609 369 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 AGR3Q8TD06 166 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 LKAAEAR1Q8TD35 194 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 FGF14Q92915 247 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 SLC40A1Q9NP59 571 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 SARS2Q9NP81 518 aaKnown RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 TCF7L2Q9NQB0 619 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 SPATS2LQ9NUQ6 558 aaKnown RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 GTSE1Q9NYZ3 720 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 THAP10Q9P2Z0 257 aaPredicted RBP12.76□□□□□ -0.37
SNX1-211ENST00000560829 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TRIM33Q9UPN9 1127 aa12.76□□□□□ -0.37
SNX1-211ENST00000560829 TBC1D3BA6NDS4 549 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 SUPT3HB4E1H0 165 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 EIF3FO00303 357 aaPredicted RBP12.75□□□□□ -0.37
SNX1-211ENST00000560829 SUPT3HO75486 399 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 KAT7O95251 611 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 RPS17P08708 135 aaKnown RBP12.75□□□□□ -0.37
SNX1-211ENST00000560829 HLA-EP13747 358 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 GFAPP14136 432 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 DGKAP23743 735 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 MTHFRP42898 656 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 RGS4P49798 205 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 KCNJ2P63252 427 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 SATB1Q01826 763 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
SNX1-211ENST00000560829 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 Q6ZVL8 140 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 SFTPA1Q8IWL2 248 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 EXT2Q93063 718 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 PANX3Q96QZ0 392 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 KXD1Q9BQD3 176 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 SHCBP1LQ9BZQ2 653 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 HCN2Q9UL51 889 aa12.75□□□□□ -0.37
SNX1-211ENST00000560829 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 UBFD1O14562 309 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 SPINT1O43278 529 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 MAGEC1O60732 1142 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 FGF4P08620 206 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 GRIA2P42262 883 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 HK3P52790 923 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 INHBCP55103 352 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 DLX2Q07687 328 aaPredicted RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TTLL9Q3SXZ7 439 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SERPINA13PQ6UXR4 307 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 GPSM1Q86YR5 675 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 DDHD1Q8NEL9 900 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ARRDC3Q96B67 414 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TRMT61BQ9BVS5 477 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 SPATA16Q9BXB7 569 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 CDYLQ9Y232 598 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TMEM233B4DJY2 109 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 AREL1O15033 823 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SIX3O95343 332 aaPredicted RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 TRIM16O95361 564 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 JUNP05412 331 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 CBSLP0DN79 551 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ESRRAP11474 423 aaPredicted RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 GM2AP17900 193 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 GDI1P31150 447 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms