RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 SQSTM1Q13501 440 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ARHGAP40Q5TG30 622 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 GPR155Q7Z3F1 870 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CCDC110Q8TBZ0 833 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 VPS35Q96QK1 796 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 FICDQ9BVA6 458 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 SARS2Q9NP81 518 aaKnown RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TRMT1Q9NXH9 659 aaKnown RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ACSL6Q9UKU0 697 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 PPP2R2CQ9Y2T4 447 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TCRBV7S2A1N4TA0A589 114 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 KCNN4O15554 427 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ZSCAN12O43309 604 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A9O60656 530 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 FTCDO95954 541 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 FGF3P11487 239 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 BRAFP15056 766 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A6P19224 532 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A1P22309 533 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A4P22310 534 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A3P35503 534 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CLCNKAP51800 687 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 MAPK10P53779 464 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UBE2IP63279 158 aaKnown RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 BIRC2Q13490 618 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 PEX6Q13608 980 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CHRNA6Q15825 494 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ANKRD20A2Q5SQ80 823 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ANKRD20A1Q5TYW2 823 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ANKRD20A3Q5VUR7 823 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CCDC70Q6NSX1 233 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 FAM151BQ6UXP7 276 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 GLT6D1Q7Z4J2 308 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 KIAA1328Q86T90 577 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ZFAND4Q86XD8 727 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 USP7Q93009 1102 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UBL7Q96S82 380 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 CMKLR1Q99788 373 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TBC1D10AQ9BXI6 508 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 TRABDQ9H4I3 376 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A7Q9HAW7 530 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A10Q9HAW8 530 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 UGT1A8Q9HAW9 530 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 RAD18Q9NS91 495 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 KCTD3Q9Y597 815 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 ARL5AQ9Y689 179 aa13.81□□□□□ -0.2
TNFAIP2-207ENST00000560562 GOLGA6L9A6NEM1 432 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 NVLO15381 856 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 C1QL1O75973 258 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 ZNF7P17097 686 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 SPAM1P38567 509 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 CTSCP53634 463 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 KLF1Q13351 362 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 SEPT7Q16181 437 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 CLPPQ16740 277 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 DENND5AQ6IQ26 1287 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 RANBP10Q6VN20 620 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 LRRTM4Q86VH4 590 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 SRPK1Q96SB4 655 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 OCIAD1Q9NX40 245 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 ZNF624Q9P2J8 865 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 PDP2Q9P2J9 529 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 CPNE7Q9UBL6 633 aa13.8□□□□□ -0.2
TNFAIP2-207ENST00000560562 GPR89AB7ZAQ6 455 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 ATXN7O15265 892 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 VEGFDO43915 354 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 CDK14O94921 469 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 GPR89BP0CG08 455 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 WT1P19544 449 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 SLC19A1P41440 591 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 GEMP55040 296 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 GPLD1P80108 840 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 INSCQ1MX18 579 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 BROXQ5VW32 411 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 TMEM71Q6P5X7 295 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 XKR5Q6UX68 686 aa13.79□□□□□ -0.2
TNFAIP2-207ENST00000560562 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms