RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CLCN7P51798 805 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 RHDQ02161 417 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 MED21Q13503 144 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 DMC1Q14565 340 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PTPRCAPQ14761 206 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TSNQ15631 228 aaKnown RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 TRIP10Q15642 601 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 GEN1Q17RS7 908 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TTLL9Q3SXZ7 439 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PDCD4Q53EL6 469 aaKnown RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 ARPINQ7Z6K5 226 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TICAM1Q8IUC6 712 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PIANPQ8IYJ0 282 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PDPRQ8NCN5 879 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ICA1LQ8NDH6 482 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 UBTD2Q8WUN7 234 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PBXIP1Q96AQ6 731 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 MOCOSQ96EN8 888 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 LINGO1Q96FE5 620 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 EXOC2Q96KP1 924 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PPP1R36Q96LQ0 422 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 UHRF1Q96T88 793 aaPredicted RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 NPAS2Q99743 824 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 GPATCH1Q9BRR8 931 aaKnown RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 HTATIP2Q9BUP3 242 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 BRINP2Q9C0B6 783 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CEP44Q9C0F1 390 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 FAM192AQ9GZU8 254 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 CLPBQ9H078 707 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ZBP1Q9H171 429 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ZNF334Q9HCZ1 680 aaPredicted RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 TNFRSF12AQ9NP84 129 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 C8orf4Q9NR00 106 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ZIM2Q9NZV7 527 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 RIMS3Q9UJD0 308 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ADAMTS6Q9UKP5 1117 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 G3BP2Q9UN86 482 aaKnown RBP9.61□□□□□ -0.87
RTF1-206ENST00000560447 FAM50BQ9Y247 325 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 SH3BP1Q9Y3L3 701 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 DTNAQ9Y4J8 743 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PCDHB9Q9Y5E1 797 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 ACTL7AQ9Y615 435 aa9.61□□□□□ -0.87
RTF1-206ENST00000560447 PTPRSQ13332 1948 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 DNAH12Q6ZR08 3092 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 TCRBV3S1A0A5B6 114 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 KANSL1LA0AUZ9 987 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 AQP12BA6NM10 295 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 PIP5K1BO14986 540 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ANGPT2O15123 496 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 RAD51BO15315 384 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 CFLARO15519 480 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 DENRO43583 198 aaKnown RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 DNAJA2O60884 412 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 WDR47O94967 919 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ADH1AP07327 375 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 CHRM3P20309 590 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 NFKBIAP25963 317 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 SLC7A1P30825 629 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 PIK3CGP48736 1102 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 SNRPD1P62314 119 aaKnown RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 ERVK-8P63133 956 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 KIF19Q2TAC6 998 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 PLEKHG6Q3KR16 790 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 CLEC6AQ6EIG7 209 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 TMEM154Q6P9G4 183 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 LILRA6Q6PI73 481 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 MACC1Q6ZN28 852 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 RNF111Q6ZNA4 994 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 GPRIN3Q6ZVF9 776 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 TMC8Q8IU68 726 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 FUNDC1Q8IVP5 155 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 AQP12AQ8IXF9 295 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 MYO1HQ8N1T3 1032 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 KIAA1958Q8N8K9 716 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ARL14EPQ8N8R7 260 aaPredicted RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 BHLHE22Q8NFJ8 381 aaPredicted RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 TRPC4APQ8TEL6 797 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 WBP2Q969T9 261 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ULK4Q96C45 1275 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 TUBGCP3Q96CW5 907 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 VWCEQ96DN2 955 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 TRAPPC9Q96Q05 1148 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 HGH1Q9BTY7 390 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 EMILIN2Q9BXX0 1053 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 LRRC3Q9BY71 257 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 FAM126AQ9BYI3 521 aaPredicted RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 TRIM54Q9BYV2 358 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 CPEB1Q9BZB8 566 aaKnown RBP9.6□□□□□ -0.87
RTF1-206ENST00000560447 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 RDH14Q9HBH5 336 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ACSS2Q9NR19 701 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 AIG1Q9NVV5 245 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 ADA2Q9NZK5 511 aa9.6□□□□□ -0.87
RTF1-206ENST00000560447 CCDC167Q9P0B6 97 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms