RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 TUBBP07437 444 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 ALPIP09923 528 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 RABIFP47224 123 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 LIG3P49916 1009 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 STC1P52823 247 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 MSLNQ13421 630 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 NR0B2Q15466 257 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 CNGA3Q16281 694 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 HIF1AQ16665 826 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 DEFB133Q30KQ1 61 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 PCID2Q5JVF3 399 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 TPRG1LQ5T0D9 272 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 TEX35Q5T0J7 233 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 LIPIQ6XZB0 460 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 ZNF534Q76KX8 674 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 TMC3Q7Z5M5 1100 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 CAND1Q86VP6 1230 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 CCNJLQ8IV13 435 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 NRSN1Q8IZ57 195 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 DENND6BQ8NEG7 585 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 PPHLN1Q8NEY8 458 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 BLOC1S5Q8TDH9 187 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 UBXN4Q92575 508 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 TRIM4Q9C037 500 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 MRM3Q9HC36 420 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 PKD2L2Q9NZM6 624 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 NFKBIL1Q9UBC1 381 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 MTRF1LQ9UGC7 380 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 PKP3Q9Y446 797 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 PCDHGA7Q9Y5G6 932 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 HEMK1Q9Y5R4 338 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-224ENST00000559361 RELNP78509 3460 aa16.67■□□□□ 0.26
PSEN1-224ENST00000559361 SDR42E2A6NKP2 422 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 TP73O15350 636 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 SUV39H1O43463 412 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 ITGB2P05107 769 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 PYGLP06737 847 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 RHOXF2BP0C7M4 288 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 JUNDP17535 347 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 LPOP22079 712 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-224ENST00000559361 LHCGRP22888 699 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 ADRA1DP25100 572 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 MCM3P25205 808 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 HADHAP40939 763 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 GRIA1P42261 906 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 PLTPP55058 493 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 DCDC1P59894 354 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 NOTCH2Q04721 2471 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 EIF2B5Q13144 721 aaKnown RBP16.66■□□□□ 0.26
PSEN1-224ENST00000559361 SGCGQ13326 291 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 OLIG2Q13516 323 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 LRRC73Q5JTD7 316 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 ZNF765Q7L2R6 523 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 SLC35F3Q8IY50 421 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 CBARPQ8N350 705 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-224ENST00000559361 DTX3LQ8TDB6 740 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 RHOXF2Q9BQY4 288 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 C1QTNF2Q9BXJ5 285 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 SAMD15Q9P1V8 674 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 ITM2BQ9Y287 266 aa16.66■□□□□ 0.26
PSEN1-224ENST00000559361 GOLGA8MH3BSY2 632 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 PRKCGP05129 697 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 TERF1P54274 439 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 SESN2P58004 480 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-224ENST00000559361 PFN3P60673 137 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 PTSQ03393 145 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 PDE1CQ14123 709 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-224ENST00000559361 FOXR1Q6PIV2 292 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 ATG14Q6ZNE5 492 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 CENPUQ71F23 418 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 TSPAN33Q86UF1 283 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 TTC30BQ8N4P2 665 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 LRRN4CLQ8ND94 238 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 LMX1AQ8TE12 382 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 NAT6Q93015 286 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 TBATAQ96M53 351 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 COQ10AQ96MF6 247 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 PLEKHG4BQ96PX9 1271 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-224ENST00000559361 GGT7Q9UJ14 662 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 SPO11Q9Y5K1 396 aa16.65■□□□□ 0.26
PSEN1-224ENST00000559361 MROH6A6NGR9 719 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 E7ESA3 106 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 LMO7DNF2Z398 122 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 STX7O15400 261 aaKnown RBP16.64■□□□□ 0.25
PSEN1-224ENST00000559361 LDB2O43679 373 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 CLDN7O95471 211 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 TTC4O95801 387 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 PIRTP0C851 137 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 PSMA3P25788 255 aa16.64■□□□□ 0.25
PSEN1-224ENST00000559361 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms