RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TEX45Q8NA69 505 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 KDM1BQ8NB78 822 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SEMA6DQ8NFY4 1073 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 OR10S1Q8NGN2 331 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PRSS3P2Q8NHM4 247 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 EXD1Q8NHP7 514 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TBC1D16Q8TBP0 767 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 UTP15Q8TED0 518 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PPP4R1Q8TF05 950 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 HASPINQ8TF76 798 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 NTN5Q8WTR8 489 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 DNAAF4Q8WXU2 420 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ROBO4Q8WZ75 1007 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ATP6V0A1Q93050 837 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SNX21Q969T3 373 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SPSB1Q96BD6 273 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TXNDC15Q96J42 360 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CDHR1Q96JP9 859 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PPP1R13BQ96KQ4 1090 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PRMT6Q96LA8 375 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 RMDN2Q96LZ7 410 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SFXN2Q96NB2 322 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 INTS14Q96SY0 518 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 EGFL8Q99944 293 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 WDR77Q9BQA1 342 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 HAUS8Q9BT25 410 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FNDC11Q9BVV2 318 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 GTPBP2Q9BX10 602 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FUT8Q9BYC5 575 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FAM234AQ9H0X4 552 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MAP6D1Q9H9H5 199 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ADPRHL2Q9NX46 363 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 AKAP7Q9P0M2 348 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SEPT10Q9P0V9 454 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MOSPD1Q9UJG1 213 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FBXL2Q9UKC9 423 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CPSF3Q9UKF6 684 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ODF2LQ9ULJ1 636 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 WBP11Q9Y2W2 641 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 KNSTRNQ9Y448 316 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TNFRSF18Q9Y5U5 241 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 LIPGQ9Y5X9 500 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ARHGEF40Q8TER5 1519 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 IGSF1Q8N6C5 1336 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM272A0A1B0GTI8 110 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SMIM35A0A1B0GVV1 85 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 hDV102S1A0JD36 115 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 LRRD1A4D1F6 860 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM8BA6NDV4 472 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 GAGE12JA6NER3 117 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 ENO4A6NNW6 628 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 C1QTNF3-AMACRE9PGA6 284 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 H0YGN5 161 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 DNM1LO00429 736 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 VWA5AO00534 786 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TIMM23O14925 209 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 XRCC3O43542 346 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 LDB2O43679 373 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 NDUFB8O95169 186 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 VNN2O95498 520 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 MT-ND3P03897 115 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 KLKB1P03952 638 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 GBAP04062 536 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 RLN1P04808 185 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 PRKCGP05129 697 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 HMOX1P09601 288 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TGFB3P10600 412 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 P4HA1P13674 534 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 NAGAP17050 411 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 CASTP20810 708 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 CALRP27797 417 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 HOXC8P31273 242 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 HNRNPH1P31943 449 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SOAT1P35610 550 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 ALDH7A1P49419 539 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 RAD23BP54727 409 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 ELLP55199 621 aaPredicted RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TAS2R38P59533 333 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SELENOVP59797 346 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 CDK3Q00526 305 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TFF2Q03403 129 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 PPATQ06203 517 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 ACSM1Q08AH1 577 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 PPIGQ13427 754 aaKnown RBP eCLIP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 LAMB3Q13751 1172 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 TUBB2AQ13885 445 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 MELKQ14680 651 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SMC1AQ14683 1233 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 MORF4L2Q15014 288 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 RRS1Q15050 365 aaKnown RBP2.27□□□□□ -2.05
GABPB1-209ENST00000559100 VWC2Q2TAL6 325 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 C2orf76Q3KRA6 126 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 FSCBQ5H9T9 825 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 LRRC73Q5JTD7 316 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 GLRA4Q5JXX5 417 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 MANEAQ5SRI9 462 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SHEQ5VZ18 495 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 FAM91A1Q658Y4 838 aa2.27□□□□□ -2.05
GABPB1-209ENST00000559100 SLC18B1Q6NT16 456 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms