RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 HMGB3O15347 200 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PAPSS1O43252 624 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MED24O75448 989 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 FGBP02675 491 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CYP2A6P11509 494 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SKILP12757 684 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RARGP13631 454 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SHMT1P34896 483 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CASP3P42574 277 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AMTP48728 403 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 NUDT6P53370 316 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SNRPEP62304 92 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDK3Q00526 305 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDKL1Q00532 357 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GAD2Q05329 585 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 FGFBP1Q14512 234 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TPD52L1Q16890 204 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AMZ1Q400G9 498 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 IGSF11Q5DX21 431 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TOR1AIP1Q5JTV8 583 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KIAA1755Q5JYT7 1200 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 C6orf136Q5SQH8 315 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SH2D4BQ5SQS7 431 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MACC1Q6ZN28 852 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 DPY19L3Q6ZPD9 716 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RTL10Q7L3V2 364 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AMIGO1Q86WK6 493 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 LURAP1LQ8IV03 231 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SIAH3Q8IW03 269 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SPATA6LQ8N4H0 392 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC44A3Q8N4M1 653 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TEX9Q8N6V9 391 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARL14EPQ8N8R7 260 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KCTD6Q8NC69 237 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GJC3Q8NFK1 279 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 LPGAT1Q92604 370 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PTERQ96BW5 349 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 DGAT2Q96PD7 388 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ACOX2Q99424 681 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 DCLK3Q9C098 648 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM49AQ9H0Q0 323 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ALDH8A1Q9H2A2 487 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRPV4Q9HBA0 871 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PPANQ9NQ55 473 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TSPAN16Q9UKR8 245 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 REREQ9P2R6 1566 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 RYR2Q92736 4967 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDC42BPBQ9Y5S2 1711 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 IGHV4-28A0A0C4DH34 117 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 TCRBV7S3A2A0A539 114 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ILVBLA1L0T0 632 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ITM2AO43736 263 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 RTN2O75298 545 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 TBX10O75333 385 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SERPINI2O75830 405 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 KRT33AO76009 404 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRSS2P07478 247 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 C8orf89P0DMQ9 161 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 DAOP14920 347 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRLRP16471 622 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SRD5A1P18405 259 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MUTP22033 750 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 NR4A1P22736 598 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 HOXA7P31268 230 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 TNFSF8P32971 234 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 IDUAP35475 653 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 OR3A3P47888 321 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 IRX4P78413 519 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 UBXN1Q04323 297 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC18A2Q05940 514 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 RBPJQ06330 500 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ILF3Q12906 894 aaKnown RBP eCLIP1.34□□□□□ -2.196e-6■□□□□ 8.6
CTDSPL2-202ENST00000558373 RALGDSQ12967 914 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 TSTA3Q13630 321 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PTK6Q13882 451 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MYBPC2Q14324 1141 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MVPQ14764 893 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CALCRLQ16602 461 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SRSF7Q16629 238 aaKnown RBP eCLIP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZXDCQ2QGD7 858 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ACCSLQ4AC99 568 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ESCO2Q56NI9 601 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 GLRA4Q5JXX5 417 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ENTPD8Q5MY95 495 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PIK3CD-AS1Q5SR53 167 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 DCAF12L2Q5VW00 463 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 OLFML2AQ68BL7 652 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 IYDQ6PHW0 289 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CRIP3Q6Q6R5 217 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF704Q6ZNC4 412 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC16A12Q6ZSM3 486 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SHFQ7M4L6 423 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 DNAJB7Q7Z6W7 309 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PM20D2Q8IYS1 436 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MUC20Q8N307 709 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 TMEM217Q8N7C4 229 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ROBO4Q8WZ75 1007 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MGME1Q9BQP7 344 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF747Q9BV97 191 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLK3Q9H4B4 646 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms