RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ELMO2Q96JJ3 720 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 PRRX2Q99811 253 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 MYOCQ99972 504 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 AARSD1Q9BTE6 412 aaKnown RBP12.27□□□□□ -0.45
TPM1-209ENST00000558072 LRFN3Q9BTN0 628 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 FAM96AQ9H5X1 160 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 SSU72Q9NP77 194 aaKnown RBP12.27□□□□□ -0.45
TPM1-209ENST00000558072 IL1RAPL1Q9NZN1 696 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 MARCH4Q9P2E8 410 aaPredicted RBP12.27□□□□□ -0.45
TPM1-209ENST00000558072 TBK1Q9UHD2 729 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 CRYL1Q9Y2S2 319 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.27□□□□□ -0.45
TPM1-209ENST00000558072 SLCO1B1Q9Y6L6 691 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 PLXNA2O75051 1894 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
TPM1-209ENST00000558072 C17orf113A0A1B0GUU1 675 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 FADS2P1A8MWK0 482 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 TRIM49D1C9J1S8 452 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 SASH3O75995 380 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 ASMTLO95671 621 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 GSTA1P08263 222 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 CBSLP0DN79 551 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 GNSP15586 552 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 CHRM3P20309 590 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 GCAP28676 217 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 FMO4P31512 558 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 CBSP35520 551 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 RGS4P49798 205 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 THOP1P52888 689 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 RAB10P61026 200 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 INPP5AQ14642 412 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 EFTUD2Q15029 972 aaKnown RBP eCLIP12.26□□□□□ -0.45
TPM1-209ENST00000558072 ANGPT1Q15389 498 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 INSCQ1MX18 579 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 BCL7AQ4VC05 210 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 UBAP2Q5T6F2 1119 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 HECTD2Q5U5R9 776 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 KLC3Q6P597 504 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 CNSTQ6PJW8 725 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 RAPH1Q70E73 1250 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 ARMCX6Q7L4S7 300 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 HEATR4Q86WZ0 1026 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 DCLK2Q8N568 766 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 NKAPQ8N5F7 415 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 GAB3Q8WWW8 586 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 ISL2Q96A47 359 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 BIRC7Q96CA5 298 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 SERAC1Q96JX3 654 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 ATP6V1G3Q96LB4 118 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 APOOQ9BUR5 198 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 IQCGQ9H095 443 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 P2RY12Q9H244 342 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 C6orf106Q9H6K1 298 aaPredicted RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 FZD3Q9NPG1 666 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 SPATS2LQ9NUQ6 558 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 ZSCAN32Q9NX65 697 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 EURLQ9NYK6 297 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 DCDC2Q9UHG0 476 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 TRMT6Q9UJA5 497 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 SLC39A10Q9ULF5 831 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 SMG5Q9UPR3 1016 aaKnown RBP12.26□□□□□ -0.45
TPM1-209ENST00000558072 CA5BQ9Y2D0 317 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 PSAT1Q9Y617 370 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 DOCK9Q9BZ29 2069 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 CACNA1IQ9P0X4 2223 aa12.26□□□□□ -0.45
TPM1-209ENST00000558072 PLXND1Q9Y4D7 1925 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 AGPSO00116 658 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 DLL1O00548 723 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 KMOO15229 486 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 INPP4BO15327 924 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 IGHV4-34P06331 123 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 APOA4P06727 396 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 ENO3P13929 434 aaPredicted RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 GABRB3P28472 473 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 BLKP51451 505 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 RACK1P63244 317 aaKnown RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 FGL2Q14314 439 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 SEMA3AQ14563 771 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 NFATC4Q14934 902 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 TEAD4Q15561 434 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 SEPT7Q16181 437 aaKnown RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 TNFAIP8L3Q5GJ75 292 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 OTOAQ7RTW8 1153 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 ABI3BPQ7Z7G0 1075 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 TBC1D1Q86TI0 1168 aaPredicted RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 TRABD2AQ86V40 505 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 MFSD2AQ8NA29 543 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 SNX19Q92543 992 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 INPP5DQ92835 1189 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 KLF6Q99612 283 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms