RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 IL9RQ01113 521 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 PPARDQ03181 441 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 TTC25Q96NG3 672 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 TXLNGYQ9BZA5 131 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 SMYD2Q9NRG4 433 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 VPS18Q9P253 973 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 PRSS21Q9Y6M0 314 aa15.1■□□□□ 0.01
NEDD1-213ENST00000557644 PCDH15Q96QU1 1955 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 RALGAPA1Q6GYQ0 2036 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SGTAO43765 313 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 NUAK1O60285 661 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SDC3O75056 442 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CSF2P04141 144 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 HK3P52790 923 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SLMAPQ14BN4 828 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 TYSND1Q2T9J0 566 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 TEDDM1Q5T9Z0 273 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CRTC3Q6UUV7 619 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CERS6Q6ZMG9 384 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 ZNF547Q8IVP9 402 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 BEND7Q8N7W2 519 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 ELF4Q99607 663 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 GAREM1Q9H706 876 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 FBXO6Q9NRD1 293 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 ZNHIT2Q9UHR6 403 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CABIN1Q9Y6J0 2220 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 ZNF292O60281 2723 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SPEGQ15772 3267 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CXorf49A8MYA2 514 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 TNFRSF10CO14798 259 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 VEGFDO43915 354 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 C1QAP02745 245 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 JUNDP17535 347 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 TTPAP49638 278 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 FRG1Q14331 258 aaKnown RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SHBQ15464 509 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 AARS2Q5JTZ9 985 aaKnown RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SDCCAG8Q86SQ7 713 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 PHACTR4Q8IZ21 702 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 FBF1Q8TES7 1133 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 DCUN1D1Q96GG9 259 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 SCARF2Q96GP6 870 aaPredicted RBP15.09■□□□□ 0.01
NEDD1-213ENST00000557644 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 FBXO5Q9UKT4 447 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CRYL1Q9Y2S2 319 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 PLEKHM1Q9Y4G2 1056 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 ST14Q9Y5Y6 855 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 PSAT1Q9Y617 370 aa15.09■□□□□ 0.01
NEDD1-213ENST00000557644 CHUKO15111 745 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 NDUFS3O75489 264 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 RASGRP1O95267 797 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 S1PR4O95977 384 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 CELA2BP08218 269 aaPredicted RBP15.08■□□□□ 0
NEDD1-213ENST00000557644 SYPP08247 313 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 ATP1B2P14415 290 aaPredicted RBP15.08■□□□□ 0
NEDD1-213ENST00000557644 NME1P15531 152 aaKnown RBP15.08■□□□□ 0
NEDD1-213ENST00000557644 MGAT5Q09328 741 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 EFTUD2Q15029 972 aaKnown RBP eCLIP15.08■□□□□ 03e-6■■■■■ 41.9
NEDD1-213ENST00000557644 CSRP2Q16527 193 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 PLA2G4EQ3MJ16 856 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 PYCR3Q53H96 274 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 TRAPPC5Q8IUR0 188 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 CNTN4Q8IWV2 1026 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 CCL4L1Q8NHW4 92 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 UHMK1Q8TAS1 419 aaKnown RBP15.08■□□□□ 0
NEDD1-213ENST00000557644 FAM167BQ9BTA0 163 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 ERVMER34-1Q9H9K5 563 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 RAB21Q9UL25 225 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 GPSM3Q9Y4H4 160 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 DGKBQ9Y6T7 804 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 TMEM131Q92545 1883 aa15.08■□□□□ 0
NEDD1-213ENST00000557644 GRID2O43424 1007 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 IVLP07476 585 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 OGNP20774 298 aaKnown RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 GABRB3P28472 473 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 ABCG1P45844 678 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 PMS2P54278 862 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 BNIP3Q12983 259 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 C1orf61Q13536 156 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 ITIH4Q14624 930 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 ZNF423Q2M1K9 1284 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 PRRT3Q5FWE3 981 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 LYPLAL1Q5VWZ2 237 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 TMEM220Q6QAJ8 160 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 MINDY1Q8N5J2 469 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 C2CD4AQ8NCU7 369 aaPredicted RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 CALML6Q8TD86 181 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 LPGAT1Q92604 370 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 TTC1Q99614 292 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 ZCCHC2Q9C0B9 1178 aaKnown RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 ZFATQ9P243 1243 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 APOBEC3BQ9UH17 382 aaKnown RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 DMXL1Q9Y485 3027 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 CFAP54Q96N23 3096 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 UBA6A0AVT1 1052 aaPredicted RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 HAUS5O94927 633 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 TNFP01375 233 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 RALBP11234 206 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 NSG1P42857 185 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms