RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 PSKH2Q96QS6 385 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 NUDCD1Q96RS6 583 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 KCTD15Q96SI1 283 aaPredicted RBP7.93□□□□□ -1.14
PCNX1-215ENST00000557428 OR2AG1Q9H205 316 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 CHST8Q9H2A9 424 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 NDST4Q9H3R1 872 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 WASH6PQ9NQA3 447 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 SCHIP1Q9P0W5 487 aaPredicted RBP7.93□□□□□ -1.14
PCNX1-215ENST00000557428 VPS18Q9P253 973 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 PCSK1NQ9UHG2 260 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 NOCTQ9UK39 431 aaKnown RBP7.93□□□□□ -1.14
PCNX1-215ENST00000557428 TTLL3Q9Y4R7 772 aa7.93□□□□□ -1.14
PCNX1-215ENST00000557428 COPG1Q9Y678 874 aaKnown RBP7.93□□□□□ -1.14
PCNX1-215ENST00000557428 MDC1Q14676 2089 aaKnown RBP7.93□□□□□ -1.14
PCNX1-215ENST00000557428 SETD2Q9BYW2 2564 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 IGHV5-51A0A0C4DH38 117 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 SSU72P8A0A1W2PR75 194 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 SYCE3A1L190 88 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 GOLGA6L3A6NEY3 463 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 OR52A4PA6NMU1 304 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 FADS2P1A8MWK0 482 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 TOX3O15405 576 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 DDX3YO15523 660 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CEACAM4O75871 244 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CYP1A1P04798 512 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 PDHA1P08559 390 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 UCHL3P15374 230 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CHRNB2P17787 502 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 NELFEP18615 380 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 RPL10P27635 214 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 OTX2P32243 289 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 HTR7P34969 479 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 HSPA9P38646 679 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 VAV2P52735 878 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 STC1P52823 247 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 AIF1P55008 147 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 RRADP55042 308 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 RPL7AP62424 266 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ACY1Q03154 408 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 PTSQ03393 145 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ATP1A4Q13733 1029 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 GPR18Q14330 331 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 PLCL1Q15111 1095 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 GPR19Q15760 415 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 VWA3BQ502W6 1294 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 VWA5B1Q5TIE3 1220 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ALS2CLQ60I27 953 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CERS6Q6ZMG9 384 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 TRIM72Q6ZMU5 477 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 PACS2Q86VP3 889 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 HPS6Q86YV9 775 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ATPAF2Q8N5M1 289 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 C3orf20Q8ND61 904 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF653Q96CK0 615 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CLIP3Q96DZ5 547 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF514Q96K75 400 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 MCCC1Q96RQ3 725 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CNPY3Q9BT09 278 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 SNRNP25Q9BV90 132 aaKnown RBP7.92□□□□□ -1.14
PCNX1-215ENST00000557428 RMI1Q9H9A7 625 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 NT5MQ9NPB1 228 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 SOHLH2Q9NX45 425 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 B3GNT3Q9Y2A9 372 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
PCNX1-215ENST00000557428 C1orf232A0A0U1RR37 186 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 UBA6A0AVT1 1052 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 SIGLEC16A6NMB1 481 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 CLDN7O95471 211 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 KLK3P07288 261 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF30P17039 623 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF8P17098 575 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 LPOP22079 712 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 PSMA2P25787 234 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 SLC19A1P41440 591 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 MMP13P45452 471 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 DRG2P55039 364 aaKnown RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 PTP4A2Q12974 167 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 GPS2Q13227 327 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 LLGL1Q15334 1064 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ZRSR2Q15696 482 aaKnown RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 CLEC16AQ2KHT3 1053 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ANO6Q4KMQ2 910 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF569Q5MCW4 686 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 DNTTIP2Q5QJE6 756 aaKnown RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 GDF7Q7Z4P5 450 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 FJX1Q86VR8 437 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 CBARPQ8N350 705 aaPredicted RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ARFGAP1Q8N6T3 406 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 LPCAT1Q8NF37 534 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ENOX1Q8TC92 643 aaKnown RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 KLHL6Q8WZ60 621 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 ZNF599Q96NL3 588 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 PCDHB18PQ96TA0 734 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 MAP3K3Q99759 626 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 MGME1Q9BQP7 344 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 TUBGCP2Q9BSJ2 902 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
PCNX1-215ENST00000557428 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
PCNX1-215ENST00000557428 SPATA16Q9BXB7 569 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms