RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 ZBED3Q96IU2 234 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 SNX27Q96L92 541 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 FYTTD1Q96QD9 318 aaKnown RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 ACCSQ96QU6 501 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 GDF15Q99988 308 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 HSD17B14Q9BPX1 270 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 EFHD1Q9BUP0 239 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 STRA6Q9BX79 667 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 DCLK3Q9C098 648 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 TLE6Q9H808 572 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 DCLRE1BQ9H816 532 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 UBE2TQ9NPD8 197 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 TAS2R14Q9NYV8 317 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 NINJ2Q9NZG7 142 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 CPSF2Q9P2I0 782 aaKnown RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 LARSQ9P2J5 1176 aaKnown RBP4.8□□□□□ -1.64
ATXN3-246ENST00000557030 KLHL13Q9P2N7 655 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 LNPEPQ9UIQ6 1025 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 VPS4AQ9UN37 437 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 L3MBTL1Q9Y468 752 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 PCDHB2Q9Y5E7 798 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 PSME4Q14997 1843 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 WDR90Q96KV7 1748 aa4.8□□□□□ -1.64
ATXN3-246ENST00000557030 MROH7Q68CQ1 1323 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 EMSYQ7Z589 1322 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 IGLV3-22A0A075B6J6 115 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 EXOC1LA0A1B0GW35 172 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CLRN2A0PK11 232 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ARHGEF35A5YM69 484 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 TCP10L2B9ZVM9 353 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 BTBD19C9JJ37 291 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ANKRD63C9JTQ0 380 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 H3BNC9 293 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 K7ENM7 598 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CLDN3O15551 220 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PSTPIP1O43586 416 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PRAMEF2O60811 474 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 EDF1O60869 148 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ZBED4O75132 1171 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ZC3H11AO75152 810 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PSMD10O75832 226 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 HSPA1AP0DMV8 641 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 HSPA1BP0DMV9 641 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 GNAZP19086 355 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MARK3P27448 753 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PTPN4P29074 926 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MAPK4P31152 587 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 HOXA13P31271 388 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 GTF2H1P32780 548 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 VHLP40337 213 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MAGEA4P43358 317 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MARCKSL1P49006 195 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MXI1P50539 228 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CCNHP51946 323 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 RAD23BP54727 409 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CDR2Q01850 454 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ROR2Q01974 943 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CYP4A11Q02928 519 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PPARDQ03181 441 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MTAPQ13126 283 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 TNIP1Q15025 636 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PDK4Q16654 411 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 USH1GQ495M9 461 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 LIN9Q5TKA1 542 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 HHATQ5VTY9 493 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ACAD10Q6JQN1 1059 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MRNIPQ6NTE8 343 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SLC30A9Q6PML9 568 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ZNF813Q6ZN06 617 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 OTUD6AQ7L8S5 288 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ECHDC2Q86YB7 292 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ARHGAP18Q8N392 663 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 KIF2BQ8N4N8 673 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ZCCHC9Q8N567 271 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 C12orf76Q8N812 135 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PNPLA1Q8N8W4 532 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 FAM71DQ8N9W8 422 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 GLIS1Q8NBF1 620 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 XXYLT1Q8NBI6 393 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PPFIBP2Q8ND30 876 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 LMO3Q8TAP4 145 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 GDAP1Q8TB36 358 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SLC20A1Q8WUM9 679 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ZFAND2BQ8WV99 257 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 FAM151AQ8WW52 585 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SHC3Q92529 594 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 PRCCQ92733 491 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ERP27Q96DN0 273 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 DTNBP1Q96EV8 351 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 RMDN2Q96LZ7 410 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 TRAPPC9Q96Q05 1148 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 NUDCD1Q96RS6 583 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SMC6Q96SB8 1091 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 FIZ1Q96SL8 496 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 TSC22D3Q99576 134 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 DDX23Q9BUQ8 820 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms